RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 PRAMEF10O60809 474 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 MFN2O95140 757 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 NFATC1O95644 943 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 IGHA1P01876 353 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 MT-ND2P03891 347 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 ALPPP05187 535 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 POLR2EP19388 210 aaKnown RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 GRIK1P39086 918 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 HNMTP50135 292 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 EFEMP1Q12805 493 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 DUSP4Q13115 394 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 EIF4HQ15056 248 aaKnown RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 SEPT7Q16181 437 aaKnown RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 HSD11B1LQ7Z5J1 315 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 CLVS1Q8IUQ0 354 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 RASGEF1AQ8N9B8 481 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 FAM83FQ8NEG4 500 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 UCN3Q969E3 161 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 C10orf90Q96M02 699 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 WRAP53Q9BUR4 548 aaKnown RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 ZBTB20Q9HC78 741 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 CPNE5Q9HCH3 593 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 DYRK4Q9NR20 520 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 SLCO1C1Q9NYB5 712 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 GDE1Q9NZC3 331 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 ADA2Q9NZK5 511 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 UBA2Q9UBT2 640 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 TNPO3Q9Y5L0 923 aaKnown RBP7.48□□□□□ -1.21
CNOT4-201ENST00000315544 RNF215Q9Y6U7 377 aa7.48□□□□□ -1.21
CNOT4-201ENST00000315544 NCF1P14598 390 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-201ENST00000315544 NBL1P41271 181 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 HALP42357 657 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 PPP5CP53041 499 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 DMWDQ09019 674 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 NPRL3Q12980 569 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 C6orf132Q5T0Z8 1188 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 NXNL2Q5VZ03 156 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 HEPHL1Q6MZM0 1159 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 LINC00114Q6XXX2 140 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 GPR141Q7Z602 305 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 ZBTB2Q8N680 514 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 CDYL2Q8N8U2 506 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 OR7A2PQ8NGA2 310 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 MAGEE2Q8TD90 523 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-201ENST00000315544 FOXJ1Q92949 421 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 GFM2Q969S9 779 aaKnown RBP7.47□□□□□ -1.21
CNOT4-201ENST00000315544 CDK5RAP1Q96SZ6 601 aaKnown RBP7.47□□□□□ -1.21
CNOT4-201ENST00000315544 TTPALQ9BTX7 342 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 Q9H521 79 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 RMND5AQ9H871 391 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 A0A0A6YYD5 115 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 E7EQ34 232 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 SLC28A1O00337 649 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 SERPINA1P01009 418 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 LDLRP01130 860 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 LAMP1P11279 417 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 CCNA2P20248 432 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 FPR1P21462 350 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 TBXA2RP21731 343 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 GKP32189 559 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 GCGRP47871 477 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 HSPA7P48741 367 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 NCS1P62166 190 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 SFSWAPQ12872 951 aaKnown RBP7.47□□□□□ -1.21
CNOT4-201ENST00000315544 CLPPQ16740 277 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-201ENST00000315544 FAM98BQ52LJ0 330 aaKnown RBP7.47□□□□□ -1.21
CNOT4-201ENST00000315544 SLC30A6Q6NXT4 461 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 CLECL1Q8IZS7 167 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 CLEC4FQ8N1N0 589 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 OR2T12Q8NG77 320 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 NSMCE2Q96MF7 247 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 ZNF681Q96N22 645 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 TSNARE1Q96NA8 513 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 MED10Q9BTT4 135 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 FAM126AQ9BYI3 521 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-201ENST00000315544 SRRQ9GZT4 340 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 ACTR8Q9H981 624 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 ZFP14Q9HCL3 533 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 KCMF1Q9P0J7 381 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 ZNF223Q9UK11 482 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-201ENST00000315544 RNF112Q9ULX5 631 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 PHF3Q92576 2039 aaKnown RBP7.47□□□□□ -1.21
CNOT4-201ENST00000315544 PDE4DIPQ5VU43 2346 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 INPP4BO15327 924 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 SUPT3HO75486 399 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 LCKP06239 509 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 GUSBP08236 651 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 CXCR2P25025 360 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 C21orf33P30042 268 aaPredicted RBP7.47□□□□□ -1.21
CNOT4-201ENST00000315544 PEBP1P30086 187 aaKnown RBP7.47□□□□□ -1.21
CNOT4-201ENST00000315544 PSMD7P51665 324 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 AGFG1P52594 562 aaKnown RBP7.47□□□□□ -1.21
CNOT4-201ENST00000315544 HBA1P69905 142 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 RAD51Q06609 339 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 ENTPD8Q5MY95 495 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 BROXQ5VW32 411 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 OR2T5Q6IEZ7 315 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 GLB1LQ6UWU2 654 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 DPPA4Q7L190 304 aa7.47□□□□□ -1.21
CNOT4-201ENST00000315544 EFL1Q7Z2Z2 1120 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms