RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 C18orf21Q32NC0 220 aaPredicted RBP19.22■□□□□ 0.67
RER1-201ENST00000306256 TOR1AIP1Q5JTV8 583 aa19.22■□□□□ 0.67
RER1-201ENST00000306256 NXPE4Q6UWF7 544 aa19.22■□□□□ 0.67
RER1-201ENST00000306256 QSOX2Q6ZRP7 698 aa19.22■□□□□ 0.67
RER1-201ENST00000306256 ZNF808Q8N4W9 903 aaPredicted RBP19.22■□□□□ 0.67
RER1-201ENST00000306256 TMEM178AQ8NBL3 297 aa19.22■□□□□ 0.67
RER1-201ENST00000306256 LRRC39Q96DD0 335 aa19.22■□□□□ 0.67
RER1-201ENST00000306256 MAGED4Q96JG8 741 aa19.22■□□□□ 0.67
RER1-201ENST00000306256 EGFL8Q99944 293 aa19.22■□□□□ 0.67
RER1-201ENST00000306256 LRFN1Q9P244 771 aa19.22■□□□□ 0.67
RER1-201ENST00000306256 EML6Q6ZMW3 1958 aa19.22■□□□□ 0.67
RER1-201ENST00000306256 DNAJC13O75165 2243 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 ZNF407Q9C0G0 2248 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 APCP25054 2843 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 ASPDHA6ND91 283 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 USP27XA6NNY8 438 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 A8MUA0 341 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 ZNHIT1O43257 154 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 SEC31AO94979 1220 aaKnown RBP19.21■□□□□ 0.67
RER1-201ENST00000306256 SP1P08047 785 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 RNH1P13489 461 aaKnown RBP19.21■□□□□ 0.67
RER1-201ENST00000306256 TPP2P29144 1249 aaPredicted RBP19.21■□□□□ 0.67
RER1-201ENST00000306256 TAS2R39P59534 338 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 ADORA2A-AS1P86434 159 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 NAA30Q147X3 362 aaPredicted RBP19.21■□□□□ 0.67
RER1-201ENST00000306256 NIPAL1Q6NVV3 410 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 MTFR2Q6P444 385 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 SYDE1Q6ZW31 735 aaPredicted RBP19.21■□□□□ 0.67
RER1-201ENST00000306256 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.21■□□□□ 0.67
RER1-201ENST00000306256 MCEMP1Q8IX19 187 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 LGI4Q8N135 537 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 TRPV3Q8NET8 790 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 ANKRD49Q8WVL7 239 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 NECTIN3Q9NQS3 549 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 KLF2Q9Y5W3 355 aaPredicted RBP19.21■□□□□ 0.67
RER1-201ENST00000306256 KCNE2Q9Y6J6 123 aa19.21■□□□□ 0.67
RER1-201ENST00000306256 IGKV3D-11A0A0A0MRZ8 115 aa19.2■□□□□ 0.66
RER1-201ENST00000306256 A0A0G2JN53 185 aa19.2■□□□□ 0.66
RER1-201ENST00000306256 SAGE2PA6NJ88 616 aa19.2■□□□□ 0.66
RER1-201ENST00000306256 PSMD12O00232 456 aaPredicted RBP19.2■□□□□ 0.66
RER1-201ENST00000306256 TP73O15350 636 aa19.2■□□□□ 0.66
RER1-201ENST00000306256 SLC25A12O75746 678 aa19.2■□□□□ 0.66
RER1-201ENST00000306256 SNRPB2P08579 225 aaKnown RBP19.2■□□□□ 0.66
RER1-201ENST00000306256 SMIM10L1P0DMW3 83 aa19.2■□□□□ 0.66
RER1-201ENST00000306256 HTR1EP28566 365 aa19.2■□□□□ 0.66
RER1-201ENST00000306256 PDIA2Q13087 525 aaKnown RBP19.2■□□□□ 0.66
RER1-201ENST00000306256 FRG1Q14331 258 aaKnown RBP19.2■□□□□ 0.66
RER1-201ENST00000306256 TSNQ15631 228 aaKnown RBP19.2■□□□□ 0.66
RER1-201ENST00000306256 MAPKAPK3Q16644 382 aa19.2■□□□□ 0.66
RER1-201ENST00000306256 SLC25A25Q6KCM7 469 aa19.2■□□□□ 0.66
RER1-201ENST00000306256 RPTNQ6XPR3 784 aa19.2■□□□□ 0.66
RER1-201ENST00000306256 BNC2Q6ZN30 1099 aaPredicted RBP19.2■□□□□ 0.66
RER1-201ENST00000306256 CREG2Q8IUH2 290 aa19.2■□□□□ 0.66
RER1-201ENST00000306256 CEP97Q8IW35 865 aa19.2■□□□□ 0.66
RER1-201ENST00000306256 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.2■□□□□ 0.66
RER1-201ENST00000306256 CA13Q8N1Q1 262 aa19.2■□□□□ 0.66
RER1-201ENST00000306256 NKAPQ8N5F7 415 aaKnown RBP19.2■□□□□ 0.66
RER1-201ENST00000306256 HORMAD2Q8N7B1 307 aa19.2■□□□□ 0.66
RER1-201ENST00000306256 FBXO36Q8NEA4 188 aa19.2■□□□□ 0.66
RER1-201ENST00000306256 CREB3L4Q8TEY5 395 aa19.2■□□□□ 0.66
RER1-201ENST00000306256 THAP3Q8WTV1 239 aaPredicted RBP19.2■□□□□ 0.66
RER1-201ENST00000306256 SMIM10Q96HG1 83 aa19.2■□□□□ 0.66
RER1-201ENST00000306256 TCRBV16S1A1N1A0A5B0 115 aa19.19■□□□□ 0.66
RER1-201ENST00000306256 URADA6NGE7 173 aa19.19■□□□□ 0.66
RER1-201ENST00000306256 PIAS1O75925 651 aa19.19■□□□□ 0.66
RER1-201ENST00000306256 WDR47O94967 919 aa19.19■□□□□ 0.66
RER1-201ENST00000306256 SERPINA6P08185 405 aa19.19■□□□□ 0.66
RER1-201ENST00000306256 ESRRAP11474 423 aaPredicted RBP19.19■□□□□ 0.66
RER1-201ENST00000306256 GDF5P43026 501 aa19.19■□□□□ 0.66
RER1-201ENST00000306256 MLF1P58340 268 aa19.19■□□□□ 0.66
RER1-201ENST00000306256 HSF1Q00613 529 aa19.19■□□□□ 0.66
RER1-201ENST00000306256 KRTCAP3Q53RY4 240 aa19.19■□□□□ 0.66
RER1-201ENST00000306256 CAPN12Q6ZSI9 719 aa19.19■□□□□ 0.66
RER1-201ENST00000306256 FRA10AC1Q70Z53 315 aa19.19■□□□□ 0.66
RER1-201ENST00000306256 SIAH3Q8IW03 269 aa19.19■□□□□ 0.66
RER1-201ENST00000306256 FAM98AQ8NCA5 519 aaKnown RBP19.19■□□□□ 0.66
RER1-201ENST00000306256 NFAM1Q8NET5 270 aaPredicted RBP19.19■□□□□ 0.66
RER1-201ENST00000306256 PRDM9Q9NQV7 894 aa19.19■□□□□ 0.66
RER1-201ENST00000306256 ZNF835Q9Y2P0 537 aa19.19■□□□□ 0.66
RER1-201ENST00000306256 OARD1Q9Y530 152 aa19.19■□□□□ 0.66
RER1-201ENST00000306256 NME2P1O60361 137 aa19.18■□□□□ 0.66
RER1-201ENST00000306256 MLYCDO95822 493 aa19.18■□□□□ 0.66
RER1-201ENST00000306256 NME2P22392 152 aa19.18■□□□□ 0.66
RER1-201ENST00000306256 BTN3A2P78410 334 aa19.18■□□□□ 0.66
RER1-201ENST00000306256 CDKL1Q00532 357 aa19.18■□□□□ 0.66
RER1-201ENST00000306256 RNFT1Q5M7Z0 435 aa19.18■□□□□ 0.66
RER1-201ENST00000306256 NCCRP1Q6ZVX7 275 aaPredicted RBP19.18■□□□□ 0.66
RER1-201ENST00000306256 ADAMTSL2Q86TH1 951 aa19.18■□□□□ 0.66
RER1-201ENST00000306256 ZNF227Q86WZ6 799 aa19.18■□□□□ 0.66
RER1-201ENST00000306256 SPPL2CQ8IUH8 684 aa19.18■□□□□ 0.66
RER1-201ENST00000306256 CPSF7Q8N684 471 aaKnown RBP19.18■□□□□ 0.66
RER1-201ENST00000306256 CCT6BQ92526 530 aa19.18■□□□□ 0.66
RER1-201ENST00000306256 RUNDC3BQ96NL0 473 aa19.18■□□□□ 0.66
RER1-201ENST00000306256 CLK4Q9HAZ1 481 aaKnown RBP19.18■□□□□ 0.66
RER1-201ENST00000306256 MOCS1Q9NZB8 636 aa19.18■□□□□ 0.66
RER1-201ENST00000306256 CTNNAL1Q9UBT7 734 aa19.18■□□□□ 0.66
RER1-201ENST00000306256 NCF1BA6NI72 391 aaPredicted RBP19.17■□□□□ 0.66
RER1-201ENST00000306256 NCF1CA8MVU1 366 aaPredicted RBP19.17■□□□□ 0.66
RER1-201ENST00000306256 EFCAB8A8MWE9 144 aa19.17■□□□□ 0.66
RER1-201ENST00000306256 ASNA1O43681 348 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms