RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 CDK1P06493 297 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 TIA1P31483 386 aaKnown RBP eCLIP23.4■■□□□ 1.344e-6■■■□□ 18.3
SPTSSA-201ENST00000298130 DEFB103AP81534 67 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 DMC1Q14565 340 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 SLC5A12Q1EHB4 618 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 LEXMQ3ZCV2 418 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 AGAP7PQ5VUJ5 663 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 TTC23LQ6PF05 361 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 ZNF605Q86T29 641 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 DUSP12Q9UNI6 340 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 PADI2Q9Y2J8 665 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 NPIPB8E9PQR5 432 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 H0YIV9 168 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 EIF3FO00303 357 aaPredicted RBP23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 SLC16A5O15375 505 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 PSIP1O75475 530 aaKnown RBP23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 PCGF2P35227 344 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 FEN1P39748 380 aaKnown RBP23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 METAP1P53582 386 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 MED22Q15528 200 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 COMMD6Q7Z4G1 85 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 BCL7BQ9BQE9 202 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 CDADC1Q9BWV3 514 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 IMPAD1Q9NX62 359 aa23.4■■□□□ 1.34
SPTSSA-201ENST00000298130 TRAV19A0A0A6YYK7 116 aa23.39■■□□□ 1.34
SPTSSA-201ENST00000298130 PITPNM1O00562 1244 aa23.39■■□□□ 1.34
SPTSSA-201ENST00000298130 GRM6O15303 877 aa23.39■■□□□ 1.34
SPTSSA-201ENST00000298130 CTSLP07711 333 aa23.39■■□□□ 1.34
SPTSSA-201ENST00000298130 IGFBP1P08833 259 aaPredicted RBP23.39■■□□□ 1.34
SPTSSA-201ENST00000298130 ALOX12P18054 663 aa23.39■■□□□ 1.34
SPTSSA-201ENST00000298130 C2orf80Q0P641 193 aa23.39■■□□□ 1.34
SPTSSA-201ENST00000298130 SLBPQ14493 270 aaKnown RBP eCLIP23.39■■□□□ 1.34
SPTSSA-201ENST00000298130 KLHL17Q6TDP4 642 aa23.39■■□□□ 1.34
SPTSSA-201ENST00000298130 LSRQ86X29 649 aaPredicted RBP23.39■■□□□ 1.34
SPTSSA-201ENST00000298130 TMC8Q8IU68 726 aa23.39■■□□□ 1.34
SPTSSA-201ENST00000298130 CPXM2Q8N436 756 aa23.39■■□□□ 1.34
SPTSSA-201ENST00000298130 ZNF480Q8WV37 535 aa23.39■■□□□ 1.34
SPTSSA-201ENST00000298130 ACAT2Q9BWD1 397 aa23.39■■□□□ 1.34
SPTSSA-201ENST00000298130 BTNL2Q9UIR0 455 aa23.39■■□□□ 1.34
SPTSSA-201ENST00000298130 NPC1O15118 1278 aa23.39■■□□□ 1.33
SPTSSA-201ENST00000298130 UPK1BO75841 260 aa23.39■■□□□ 1.33
SPTSSA-201ENST00000298130 PABPC1P11940 636 aaKnown RBP23.39■■□□□ 1.33
SPTSSA-201ENST00000298130 RECQLP46063 649 aaPredicted RBP23.39■■□□□ 1.33
SPTSSA-201ENST00000298130 TAS2R50P59544 299 aa23.39■■□□□ 1.33
SPTSSA-201ENST00000298130 TBPL1P62380 186 aa23.39■■□□□ 1.33
SPTSSA-201ENST00000298130 FADDQ13158 208 aa23.39■■□□□ 1.33
SPTSSA-201ENST00000298130 RPS26P11Q5JNZ5 115 aaPredicted RBP23.39■■□□□ 1.33
SPTSSA-201ENST00000298130 TPRG1LQ5T0D9 272 aa23.39■■□□□ 1.33
SPTSSA-201ENST00000298130 SPATC1Q76KD6 591 aa23.39■■□□□ 1.33
SPTSSA-201ENST00000298130 LRG1P02750 347 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 KLK1P06870 262 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 HOXB6P17509 224 aaKnown RBP23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 SERPINB1P30740 379 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 CHI3L1P36222 383 aaPredicted RBP23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 HNF4AP41235 474 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 IFI44LQ53G44 452 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 ARMC8Q8IUR7 673 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 CFAP206Q8IYR0 622 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 ST13P5Q8NFI4 369 aaPredicted RBP23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 B3GNT7Q8NFL0 401 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 IL4I1Q96RQ9 567 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 FAM129BQ96TA1 746 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 SPG21Q9NZD8 308 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 PCDHGA4Q9Y5G9 962 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 SSX4O60224 188 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 CATP04040 527 aaKnown RBP23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 TMEM115Q12893 351 aaPredicted RBP23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 SELENBP1Q13228 472 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 MPP7Q5T2T1 576 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 SLC46A3Q7Z3Q1 461 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 MYDGFQ969H8 173 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 KCNS3Q9BQ31 491 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 CPEB1Q9BZB8 566 aaKnown RBP23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 GULP1Q9UBP9 304 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 PLAGL1Q9UM63 463 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 HCFC2Q9Y5Z7 792 aa23.38■■□□□ 1.33
SPTSSA-201ENST00000298130 AGAP5A6NIR3 686 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 ADAMDEC1O15204 470 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 KCNK2O95069 426 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 CTSAP10619 480 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 TIMP2P16035 220 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 GCNT6Q5T4J0 391 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 SLCO4C1Q6ZQN7 724 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 Q8N9G6 341 aaPredicted RBP23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 COQ8BQ96D53 544 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 IL17FQ96PD4 163 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 C5AR2Q9P296 337 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 KCNE2Q9Y6J6 123 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 TNFRSF21O75509 655 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 ASMTP46597 345 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 SLC7A9P82251 487 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 MICAQ29983 383 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 ANXA8L1Q5VT79 327 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 MED27Q6P2C8 311 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 CPA6Q8N4T0 437 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 PARP16Q8N5Y8 322 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 C19orf43Q9BQ61 176 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 ZNF282Q9UDV7 671 aaPredicted RBP23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 PRKAB1Q9Y478 270 aa23.37■■□□□ 1.33
SPTSSA-201ENST00000298130 CFAP20Q9Y6A4 193 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms