RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 PDCD4Q53EL6 469 aaKnown RBP18.01■□□□□ 0.47
PDLIM3-202ENST00000284770 AGKQ53H12 422 aa18.01■□□□□ 0.47
PDLIM3-202ENST00000284770 TOR1AIP1Q5JTV8 583 aa18.01■□□□□ 0.47
PDLIM3-202ENST00000284770 STPG1Q5TH74 334 aa18.01■□□□□ 0.47
PDLIM3-202ENST00000284770 GK5Q6ZS86 529 aa18.01■□□□□ 0.47
PDLIM3-202ENST00000284770 ARHGAP22Q7Z5H3 698 aa18.01■□□□□ 0.47
PDLIM3-202ENST00000284770 CSNK1A1LQ8N752 337 aa18.01■□□□□ 0.47
PDLIM3-202ENST00000284770 WDR48Q8TAF3 677 aa18.01■□□□□ 0.47
PDLIM3-202ENST00000284770 CCDC167Q9P0B6 97 aa18.01■□□□□ 0.47
PDLIM3-202ENST00000284770 MDC1Q14676 2089 aaKnown RBP18.01■□□□□ 0.47
PDLIM3-202ENST00000284770 URADA6NGE7 173 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 TXNDC9O14530 226 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 ERI3O43414 337 aaKnown RBP18■□□□□ 0.47
PDLIM3-202ENST00000284770 SDC1P18827 310 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 BSGP35613 385 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 CPOXP36551 454 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 PLA2G16P53816 162 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 CYLC2Q14093 348 aaPredicted RBP18■□□□□ 0.47
PDLIM3-202ENST00000284770 SPIDRQ14159 915 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 HKDC1Q2TB90 917 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 WASHC2DQ5SRD0 308 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 TMTC4Q5T4D3 741 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 OR4C11Q6IEV9 310 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 ABHD17CQ6PCB6 329 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 PAGE2Q7Z2X7 111 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 RBM15BQ8NDT2 890 aaKnown RBP18■□□□□ 0.47
PDLIM3-202ENST00000284770 ZNF285Q96NJ3 590 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 KCNC2Q96PR1 638 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 EBPLQ9BY08 206 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 NLNQ9BYT8 704 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 C1orf21Q9H246 121 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 LHX9Q9NQ69 397 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 BAIAP2L1Q9UHR4 511 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 ADAM29Q9UKF5 820 aa18■□□□□ 0.47
PDLIM3-202ENST00000284770 D6RAR5 112 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 RTCAO00442 366 aaKnown RBP17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 ANKRD28O15084 1053 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 PCDH7O60245 1069 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 KLK1P06870 262 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 ANXA4P09525 319 aaPredicted RBP17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 MSL3P1P0C860 447 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 NME5P56597 212 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 KCNJ2P63252 427 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 TGM3Q08188 693 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 KCNAB1Q14722 419 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 PTGR1Q14914 329 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 TRIM40Q6P9F5 258 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 PIP4P1Q86T03 277 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 FAM9CQ8IZT9 166 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 GAL3ST3Q96A11 431 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 QRFPRQ96P65 431 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 C17orf62Q9BQA9 187 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 RTKNQ9BST9 563 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 SORBS1Q9BX66 1292 aaKnown RBP17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 DDX31Q9H8H2 851 aaKnown RBP17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 ZIM2Q9NZV7 527 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 MCM8Q9UJA3 840 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 C4orf51C9J302 202 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 TACR1P25103 407 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 TPP2P29144 1249 aaPredicted RBP17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 TSFMP43897 325 aaKnown RBP17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 ZFP36L2P47974 494 aaKnown RBP17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 ILKQ13418 452 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 MAPRE2Q15555 327 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 TCTE1Q5JU00 501 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 TMEM214Q6NUQ4 689 aaKnown RBP17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 NUDT13Q86X67 352 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 SLITRK4Q8IW52 837 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 PROKR1Q8TCW9 393 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 UTP15Q8TED0 518 aaKnown RBP17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 N4BP2L2Q92802 583 aaPredicted RBP17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 TEX37Q96LM6 180 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 CCDC74BQ96LY2 380 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 PHOX2BQ99453 314 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 TBCDQ9BTW9 1192 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 ACTL8Q9H568 366 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 PRDM7Q9NQW5 492 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 TMEM45AQ9NWC5 275 aa17.99■□□□□ 0.47
PDLIM3-202ENST00000284770 GNG14A0A1W2PPG7 69 aa17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 CFAP73A6NFT4 308 aa17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 EEDO75530 441 aaKnown RBP17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 SLC22A3O75751 556 aa17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 GBAP04062 536 aa17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 CTSBP07858 339 aa17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 SNRPB2P08579 225 aaKnown RBP17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 SMIM10L1P0DMW3 83 aa17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 UFM1P61960 85 aa17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 PRTGQ2VWP7 1150 aa17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 ABHD13Q7L211 337 aa17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 ASCL5Q7RTU5 278 aa17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 DGLUCYQ7Z3D6 616 aa17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 UTP4Q969X6 686 aaKnown RBP17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 SMIM10Q96HG1 83 aa17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 SLC45A3Q96JT2 553 aa17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 TSSK3Q96PN8 268 aa17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 TEFMQ96QE5 360 aaKnown RBP17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 STARD5Q9NSY2 213 aa17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.98■□□□□ 0.47
PDLIM3-202ENST00000284770 A0A0G2JN53 185 aa17.97■□□□□ 0.47
PDLIM3-202ENST00000284770 GYG2O15488 501 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms