RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 PLEKHM3Q6ZWE6 761 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 RNF130Q86XS8 419 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 DENND6BQ8NEG7 585 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 PDXPQ96GD0 296 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 GDF15Q99988 308 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 POLR1BQ9H9Y6 1135 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 PELI2Q9HAT8 420 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 CUEDC1Q9NWM3 386 aaPredicted RBP13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 TAS2R9Q9NYW1 312 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 ACTR10Q9NZ32 417 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 CALML5Q9NZT1 146 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 TRBV5-4A0A0C4DH59 114 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 KIR2DS5A0A0G2JLQ3 304 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 A0A0G2JNG1 304 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 MYOCOSA0A1B0GUC4 107 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 KIR2DS3K7RE56 304 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 BCHEP06276 602 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 LAMP1P11279 417 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 CKMT2P17540 419 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 PPP2CBP62714 309 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 PPP2CAP67775 309 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 PPP1R8Q12972 351 aaKnown RBP13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 KIR2DS5Q14953 304 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 FAM214AQ32MH5 1076 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 AGBL4Q5VU57 503 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 OR4C11Q6IEV9 310 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 CYP4Z2PQ8N1L4 340 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 KIAA1958Q8N8K9 716 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 RAB8BQ92930 207 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 EID2BQ96D98 161 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 DNAAF2Q9NVR5 837 aaKnown RBP13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 OR6C2Q9NZP2 312 aa13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 NKX1-2Q9UD57 310 aaPredicted RBP13.88□□□□□ -0.19
PDLIM2-201ENST00000265810 DUXAA6NLW8 204 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 MBTPS2O43462 519 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 EEDO75530 441 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 BCAS2O75934 225 aaPredicted RBP13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 CDH12P55289 794 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 ARHGAP40Q5TG30 622 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 OGFOD2Q6N063 350 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 GPR141Q7Z602 305 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 ZNF605Q86T29 641 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 BPIFB6Q8NFQ5 453 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 RERGLQ9H628 205 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 MRTO4Q9UKD2 239 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 TAPBPO15533 448 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 CLK3P49761 638 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 UGT2B15P54855 530 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 RHDQ02161 417 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 HIPK1Q86Z02 1210 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 DCP2Q8IU60 420 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 ARMC8Q8IUR7 673 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 OR4K14Q8NGD5 310 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 RASSF5Q8WWW0 418 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 SLC45A3Q96JT2 553 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 LYARQ9NX58 379 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 C5AR2Q9P296 337 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 ZNF646O15015 1829 aaPredicted RBP13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 PSIP1O75475 530 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 CREG1O75629 220 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 HSMCR30P0CW71 290 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 SIM2Q14190 667 aaPredicted RBP13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 TMEM35AQ53FP2 167 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 CLECL1Q8IZS7 167 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 OR1E3Q8WZA6 343 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 SLC6A18Q96N87 628 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 DGAT2Q96PD7 388 aa13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 TEFMQ96QE5 360 aaKnown RBP13.87□□□□□ -0.19
PDLIM2-201ENST00000265810 A0A096LPI6 279 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 SLC5A10A0PJK1 596 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 GMFGO60234 142 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 TPST2O60704 377 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 XKP51811 444 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 ADGRE1Q14246 886 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.86□□□□□ -0.197e-7■■■■■ 33.8
PDLIM2-201ENST00000265810 ATG9BQ674R7 924 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 FAAH2Q6GMR7 532 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 PEX5LQ8IYB4 626 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 SMYD1Q8NB12 490 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 NFKBIDQ8NI38 313 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 C16orf78Q8WTQ4 265 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 BIRC7Q96CA5 298 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 THAP11Q96EK4 314 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 SORBS1Q9BX66 1292 aaKnown RBP13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 DMRT3Q9NQL9 472 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 COPS7AQ9UBW8 275 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 ZSWIM8A7E2V4 1837 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 BCAT2O15382 392 aaPredicted RBP13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 GLULP15104 373 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 PRDX1Q06830 199 aaKnown RBP13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 NEDD8Q15843 81 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 CTC1Q2NKJ3 1217 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 EGLN2Q96KS0 407 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 COQ10BQ9H8M1 238 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 ANKMY1Q9P2S6 941 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 TPRKBQ9Y3C4 175 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 CNOT3O75175 753 aaKnown RBP13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 PVRP15151 417 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 SDC1P18827 310 aa13.86□□□□□ -0.19
PDLIM2-201ENST00000265810 GPX3P22352 226 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms