RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 MYLK4Q86YV6 388 aaPredicted RBP13.55□□□□□ -0.24
SSBP1-201ENST00000265304 TMEM126BQ8IUX1 230 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 ZNF781Q8N8C0 355 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 LRRC8CQ8TDW0 803 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 CHTF18Q8WVB6 975 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 SELENOMQ8WWX9 145 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 FCRL1Q96LA6 429 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 F2RL3Q96RI0 385 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 MACROD1Q9BQ69 325 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 NPLQ9BXD5 320 aaPredicted RBP13.55□□□□□ -0.24
SSBP1-201ENST00000265304 REXO4Q9GZR2 422 aaKnown RBP13.55□□□□□ -0.24
SSBP1-201ENST00000265304 SLC26A1Q9H2B4 701 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 DDX31Q9H8H2 851 aaKnown RBP13.55□□□□□ -0.24
SSBP1-201ENST00000265304 THSD1Q9NS62 852 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 SLC22A11Q9NSA0 550 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 STARD5Q9NSY2 213 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 NMRK1Q9NWW6 199 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 VPS29Q9UBQ0 182 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 ADAM29Q9UKF5 820 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 ANGPTL2Q9UKU9 493 aa13.55□□□□□ -0.24
SSBP1-201ENST00000265304 MRPS2Q9Y399 296 aaKnown RBP13.55□□□□□ -0.24
SSBP1-201ENST00000265304 ASPMQ8IZT6 3477 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 SLCO1B7G3V0H7 640 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 KIAA0754O94854 1291 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 TGFB1P01137 390 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 ALBP02768 609 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 PCNAP12004 261 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 NEFHP12036 1026 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 ALOX15P16050 662 aaPredicted RBP13.54□□□□□ -0.24
SSBP1-201ENST00000265304 ABHD18Q0P651 414 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 DSG2Q14126 1118 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 KIAA0040Q15053 153 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 SMU1Q2TAY7 513 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 SH2D4BQ5SQS7 431 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 TTC19Q6DKK2 380 aaPredicted RBP13.54□□□□□ -0.24
SSBP1-201ENST00000265304 CLEC6AQ6EIG7 209 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 MRM1Q6IN84 353 aaKnown RBP13.54□□□□□ -0.24
SSBP1-201ENST00000265304 ABHD13Q7L211 337 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 PDSS2Q86YH6 399 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 METTL4Q8N3J2 472 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 ZCCHC7Q8N3Z6 543 aaKnown RBP13.54□□□□□ -0.24
SSBP1-201ENST00000265304 RNF175Q8N4F7 328 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 PIWIL2Q8TC59 973 aaKnown RBP13.54□□□□□ -0.24
SSBP1-201ENST00000265304 RGMAQ96B86 450 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 KCNC2Q96PR1 638 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 ACPTQ9BZG2 426 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 ULBP3Q9BZM4 244 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 TGIF2Q9GZN2 237 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 ROGDIQ9GZN7 287 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 OR51B5Q9H339 312 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 PFDN4Q9NQP4 134 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 VTI1BQ9UEU0 232 aa13.54□□□□□ -0.24
SSBP1-201ENST00000265304 TMEM233B4DJY2 109 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 STMND1H3BQB6 276 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 SLC28A1O00337 649 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 PLPP1O14494 284 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 RSL1D1O76021 490 aaKnown RBP13.53□□□□□ -0.24
SSBP1-201ENST00000265304 KLHL18O94889 574 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 TGDSO95455 350 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 CHEK2O96017 543 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 NTRK1P04629 796 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 PRR35P0CG20 571 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 ACPPP15309 386 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 SPINK2P20155 84 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 IL10P22301 178 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 ARL1P40616 181 aaPredicted RBP13.53□□□□□ -0.24
SSBP1-201ENST00000265304 SKP1P63208 163 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 CYP4F2P78329 520 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 DCDP81605 110 aaKnown RBP13.53□□□□□ -0.24
SSBP1-201ENST00000265304 TGM3Q08188 693 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 NKAIN1Q4KMZ8 207 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 OR4C11Q6IEV9 310 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 MRPL14Q6P1L8 145 aaKnown RBP13.53□□□□□ -0.24
SSBP1-201ENST00000265304 C6orf15Q6UXA7 325 aaPredicted RBP13.53□□□□□ -0.24
SSBP1-201ENST00000265304 TTLL10Q6ZVT0 673 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 ESX1Q8N693 406 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 AMER3Q8N944 861 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 SNIP1Q8TAD8 396 aaKnown RBP13.53□□□□□ -0.24
SSBP1-201ENST00000265304 TWIST2Q8WVJ9 160 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 DYDC1Q8WWB3 177 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 FKBP10Q96AY3 582 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 ZNF317Q96PQ6 595 aaPredicted RBP13.53□□□□□ -0.24
SSBP1-201ENST00000265304 SHCBP1LQ9BZQ2 653 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 SLCO1B3Q9NPD5 702 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 PNPOQ9NVS9 261 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 AHSPQ9NZD4 102 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 KCMF1Q9P0J7 381 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 DHCR7Q9UBM7 475 aaKnown RBP13.53□□□□□ -0.24
SSBP1-201ENST00000265304 PADI1Q9ULC6 663 aa13.53□□□□□ -0.24
SSBP1-201ENST00000265304 CACNA1GO43497 2377 aa13.52□□□□□ -0.24
SSBP1-201ENST00000265304 MED19A0JLT2 244 aaPredicted RBP13.52□□□□□ -0.25
SSBP1-201ENST00000265304 VSTM2BA6NLU5 285 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 HDAC3O15379 428 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 ERI3O43414 337 aaKnown RBP13.52□□□□□ -0.25
SSBP1-201ENST00000265304 EDF1O60869 148 aaKnown RBP13.52□□□□□ -0.25
SSBP1-201ENST00000265304 RECKO95980 971 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 KLK3P07288 261 aaPredicted RBP13.52□□□□□ -0.25
SSBP1-201ENST00000265304 CD63P08962 238 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 RAB40ALP0C0E4 278 aa13.52□□□□□ -0.25
SSBP1-201ENST00000265304 ZNF888P0CJ79 500 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms