RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 BRF2Q9HAW0 419 aa19.7■□□□□ 0.74
RTCA-201ENST00000260563 ADGRE2Q9UHX3 823 aa19.7■□□□□ 0.74
RTCA-201ENST00000260563 SRPK3Q9UPE1 567 aa19.7■□□□□ 0.74
RTCA-201ENST00000260563 CCL27Q9Y4X3 112 aa19.7■□□□□ 0.74
RTCA-201ENST00000260563 ASPMQ8IZT6 3477 aa19.7■□□□□ 0.74
RTCA-201ENST00000260563 FITM1A5D6W6 292 aa19.69■□□□□ 0.74
RTCA-201ENST00000260563 E9PBE3 544 aa19.69■□□□□ 0.74
RTCA-201ENST00000260563 FOXE1O00358 373 aaPredicted RBP19.69■□□□□ 0.74
RTCA-201ENST00000260563 KLHL41O60662 606 aa19.69■□□□□ 0.74
RTCA-201ENST00000260563 KIAA0754O94854 1291 aa19.69■□□□□ 0.74
RTCA-201ENST00000260563 PRR35P0CG20 571 aa19.69■□□□□ 0.74
RTCA-201ENST00000260563 HSD3B1P14060 373 aa19.69■□□□□ 0.74
RTCA-201ENST00000260563 HSD3B2P26439 372 aa19.69■□□□□ 0.74
RTCA-201ENST00000260563 SERPINB1P30740 379 aa19.69■□□□□ 0.74
RTCA-201ENST00000260563 SLC5A2P31639 672 aa19.69■□□□□ 0.74
RTCA-201ENST00000260563 PIK3CBP42338 1070 aa19.69■□□□□ 0.74
RTCA-201ENST00000260563 ARSFP54793 590 aa19.69■□□□□ 0.74
RTCA-201ENST00000260563 HMGCS1Q01581 520 aa19.69■□□□□ 0.74
RTCA-201ENST00000260563 PWP1Q13610 501 aa19.69■□□□□ 0.74
RTCA-201ENST00000260563 PRTGQ2VWP7 1150 aa19.69■□□□□ 0.74
RTCA-201ENST00000260563 PRAMEF17Q5VTA0 474 aa19.69■□□□□ 0.74
RTCA-201ENST00000260563 YOD1Q5VVQ6 348 aaPredicted RBP19.69■□□□□ 0.74
RTCA-201ENST00000260563 RNF31Q96EP0 1072 aa19.69■□□□□ 0.74
RTCA-201ENST00000260563 MAGEB17A8MXT2 336 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 LSM1O15116 133 aaKnown RBP19.68■□□□□ 0.74
RTCA-201ENST00000260563 PEX11AO75192 247 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 CLEC3AO75596 197 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 DCTN3O75935 186 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 HBQ1P09105 142 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 ZNF28P17035 718 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 CD82P27701 267 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 RPS13P62277 151 aaKnown RBP19.68■□□□□ 0.74
RTCA-201ENST00000260563 NR6A1Q15406 480 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 ATP6AP1LQ52LC2 224 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 MANEAQ5SRI9 462 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 METTL21CQ5VZV1 264 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 VN1R5Q7Z5H4 357 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 NT5CQ8TCD5 201 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 CREB3L4Q8TEY5 395 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 CLIP3Q96DZ5 547 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 PPP3R2Q96LZ3 170 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 MACROD1Q9BQ69 325 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 DMRT3Q9NQL9 472 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 CUTCQ9NTM9 273 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 TXLNGQ9NUQ3 528 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 GIMAP2Q9UG22 337 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 TRIM33Q9UPN9 1127 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 AKAP13Q12802 2813 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 SCN3AQ9NY46 2000 aa19.68■□□□□ 0.74
RTCA-201ENST00000260563 HYKKA2RU49 373 aa19.67■□□□□ 0.74
RTCA-201ENST00000260563 RSL1D1O76021 490 aaKnown RBP19.67■□□□□ 0.74
RTCA-201ENST00000260563 STK17BO94768 372 aa19.67■□□□□ 0.74
RTCA-201ENST00000260563 NTRK1P04629 796 aa19.67■□□□□ 0.74
RTCA-201ENST00000260563 LBPP18428 481 aa19.67■□□□□ 0.74
RTCA-201ENST00000260563 PRPH2P23942 346 aa19.67■□□□□ 0.74
RTCA-201ENST00000260563 EMP3P54852 163 aa19.67■□□□□ 0.74
RTCA-201ENST00000260563 NDUFA9Q16795 377 aa19.67■□□□□ 0.74
RTCA-201ENST00000260563 MUM1Q2TAK8 710 aa19.67■□□□□ 0.74
RTCA-201ENST00000260563 FAM214AQ32MH5 1076 aa19.67■□□□□ 0.74
RTCA-201ENST00000260563 GALNTL6Q49A17 601 aa19.67■□□□□ 0.74
RTCA-201ENST00000260563 GARNL3Q5VVW2 1013 aa19.67■□□□□ 0.74
RTCA-201ENST00000260563 MTDHQ86UE4 582 aaKnown RBP19.67■□□□□ 0.74
RTCA-201ENST00000260563 ZNF578Q96N58 590 aaPredicted RBP19.67■□□□□ 0.74
RTCA-201ENST00000260563 SLC12A4Q9UP95 1085 aa19.67■□□□□ 0.74
RTCA-201ENST00000260563 URADA6NGE7 173 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 NPIPB8E9PQR5 432 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 SERPINA6P08185 405 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 GCGRP47871 477 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 AP5B1Q2VPB7 878 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 SPDYAQ5MJ70 313 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 RHBDD2Q6NTF9 364 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 TTLL10Q6ZVT0 673 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 KCT2Q8NC54 265 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 ZCCHC10Q8TBK6 192 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 C10orf90Q96M02 699 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 SLC6A16Q9GZN6 736 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 DHCR7Q9UBM7 475 aaKnown RBP19.66■□□□□ 0.74
RTCA-201ENST00000260563 VPS29Q9UBQ0 182 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 PPT2Q9UMR5 302 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 TMEM184BQ9Y519 407 aaPredicted RBP19.66■□□□□ 0.74
RTCA-201ENST00000260563 STMND1H3BQB6 276 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 CCDC22O60826 627 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 DLGAP3O95886 979 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 TGFB1P01137 390 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 STXBP1P61764 594 aaKnown RBP19.66■□□□□ 0.74
RTCA-201ENST00000260563 TBC1D25Q3MII6 688 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 C6orf136Q5SQH8 315 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 TMEM198Q66K66 360 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 OGFOD2Q6N063 350 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 TMEM214Q6NUQ4 689 aaKnown RBP19.66■□□□□ 0.74
RTCA-201ENST00000260563 ABHD13Q7L211 337 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 LRRC37BQ96QE4 947 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 LRTM1Q9HBL6 345 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 C1orf109Q9NX04 203 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 NDOR1Q9UHB4 597 aa19.66■□□□□ 0.74
RTCA-201ENST00000260563 A0A1B0GX78 115 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 DSCR3O14972 297 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 UBDO15205 165 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 ETHE1O95571 254 aa19.65■□□□□ 0.74
RTCA-201ENST00000260563 NCF2P19878 526 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms