RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 RBBP4Q09028 425 aa14.62□□□□□ -0.07
DDX56-201ENST00000258772 ELOAQ14241 798 aaKnown RBP14.62□□□□□ -0.07
DDX56-201ENST00000258772 EXOC3L2Q2M3D2 409 aa14.62□□□□□ -0.07
DDX56-201ENST00000258772 ZNF605Q86T29 641 aa14.62□□□□□ -0.07
DDX56-201ENST00000258772 SLC22A16Q86VW1 577 aa14.62□□□□□ -0.07
DDX56-201ENST00000258772 LGI4Q8N135 537 aa14.62□□□□□ -0.07
DDX56-201ENST00000258772 NFKBIDQ8NI38 313 aa14.62□□□□□ -0.07
DDX56-201ENST00000258772 PSMA8Q8TAA3 256 aa14.62□□□□□ -0.07
DDX56-201ENST00000258772 ZNF480Q8WV37 535 aa14.62□□□□□ -0.07
DDX56-201ENST00000258772 REPS1Q96D71 796 aa14.62□□□□□ -0.07
DDX56-201ENST00000258772 VPS35Q96QK1 796 aa14.62□□□□□ -0.07
DDX56-201ENST00000258772 PRDM8Q9NQV8 689 aa14.62□□□□□ -0.07
DDX56-201ENST00000258772 C1GALT1Q9NS00 363 aa14.62□□□□□ -0.07
DDX56-201ENST00000258772 THSD1Q9NS62 852 aa14.62□□□□□ -0.07
DDX56-201ENST00000258772 ZNF226Q9NYT6 803 aa14.62□□□□□ -0.07
DDX56-201ENST00000258772 METTL15A6NJ78 407 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 GNRH1P01148 92 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 CTSLP07711 333 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 TYRP14679 529 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 NPPBP16860 134 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 PBLDP30039 288 aaPredicted RBP14.61□□□□□ -0.07
DDX56-201ENST00000258772 EIF2DP41214 584 aaKnown RBP14.61□□□□□ -0.07
DDX56-201ENST00000258772 MAPK9P45984 424 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 PRIM2P49643 509 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 EIF2B2P49770 351 aaKnown RBP14.61□□□□□ -0.07
DDX56-201ENST00000258772 NUDT6P53370 316 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 MAPK11Q15759 364 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 CCDC80Q76M96 950 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 ARMCX6Q7L4S7 300 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 SLC46A3Q7Z3Q1 461 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 COMMD6Q7Z4G1 85 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 DENND6BQ8NEG7 585 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 ZNF675Q8TD23 568 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 IRF7Q92985 503 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 CIDECQ96AQ7 238 aaPredicted RBP14.61□□□□□ -0.07
DDX56-201ENST00000258772 RAD9AQ99638 391 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 TCF25Q9BQ70 676 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 TMEM38AQ9H6F2 299 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 POLE4Q9NR33 117 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 GPR83Q9NYM4 423 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 NINQ8N4C6 2090 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 TSPAN11A1L157 253 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 FOXE1O00358 373 aaPredicted RBP14.61□□□□□ -0.07
DDX56-201ENST00000258772 AQP9O43315 295 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 GPR37L1O60883 481 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 C1orf105O95561 183 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 MYCP01106 439 aaPredicted RBP14.61□□□□□ -0.07
DDX56-201ENST00000258772 STSP08842 583 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 FURINP09958 794 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 ITGA2P17301 1181 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 PNLIPRP1P54315 467 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 DEFB103AP81534 67 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 FCHO2Q0JRZ9 810 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 DMC1Q14565 340 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 MPEG1Q2M385 716 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 CYP27C1Q4G0S4 372 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 LILRA6Q6PI73 481 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 LACC1Q8IV20 430 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 SYTL1Q8IYJ3 562 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 DEPDC4Q8N2C3 294 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 UTP15Q8TED0 518 aaKnown RBP14.61□□□□□ -0.07
DDX56-201ENST00000258772 CYB5D2Q8WUJ1 264 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 SORCS1Q8WY21 1168 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 LINC00597Q9H2U6 94 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 EHD1Q9H4M9 534 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 ASAH2Q9NR71 780 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 SCHIP1Q9P0W5 487 aaPredicted RBP14.61□□□□□ -0.07
DDX56-201ENST00000258772 GULP1Q9UBP9 304 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 SH2B3Q9UQQ2 575 aa14.61□□□□□ -0.07
DDX56-201ENST00000258772 A8MVJ9 347 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 H3BM21 787 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 J3KTA2 159 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 SAP18O00422 153 aaKnown RBP14.6□□□□□ -0.07
DDX56-201ENST00000258772 CNOT3O75175 753 aaKnown RBP14.6□□□□□ -0.07
DDX56-201ENST00000258772 TGFB1P01137 390 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 XPAP23025 273 aaPredicted RBP14.6□□□□□ -0.07
DDX56-201ENST00000258772 GRK5P34947 590 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 TBPL1P62380 186 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 CDK6Q00534 326 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 TEKQ02763 1124 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 EEF1A2Q05639 463 aaKnown RBP14.6□□□□□ -0.07
DDX56-201ENST00000258772 C2orf80Q0P641 193 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 TSTA3Q13630 321 aaPredicted RBP14.6□□□□□ -0.07
DDX56-201ENST00000258772 PDE7AQ13946 482 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 SLBPQ14493 270 aaKnown RBP eCLIP14.6□□□□□ -0.07
DDX56-201ENST00000258772 USP43Q70EL4 1123 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 DPPA4Q7L190 304 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 ANKRD33Q7Z3H0 272 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 DSG4Q86SJ6 1040 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 STX19Q8N4C7 294 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 OR9Q2Q8NGE9 314 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 WDR48Q8TAF3 677 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 AP2M1Q96CW1 435 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 COL21A1Q96P44 957 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 MTG2Q9H4K7 406 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 ACSL6Q9UKU0 697 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 TAF4O00268 1085 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 UPK1BO75841 260 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 KLHL18O94889 574 aa14.6□□□□□ -0.07
DDX56-201ENST00000258772 RPLP0P05388 317 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms