RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 LAPTM4BQ86VI4 370 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 PTRH1Q86Y79 214 aaKnown RBP12.06□□□□□ -0.48
VPREB3-201ENST00000248948 LAS2Q8IYD9 372 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 PLD6Q8N2A8 252 aaKnown RBP12.06□□□□□ -0.48
VPREB3-201ENST00000248948 TEX19Q8NA77 164 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 ADAMTS18Q8TE60 1221 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 METTL21AQ8WXB1 218 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 TBC1D20Q96BZ9 403 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 SMIM10Q96HG1 83 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 MRPL57Q9BQC6 102 aaKnown RBP12.06□□□□□ -0.48
VPREB3-201ENST00000248948 LHPPQ9H008 270 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 ZNF700Q9H0M5 742 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 EPN3Q9H201 632 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 MRPL46Q9H2W6 279 aaKnown RBP12.06□□□□□ -0.48
VPREB3-201ENST00000248948 ZNF160Q9HCG1 818 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 CPSF2Q9P2I0 782 aaKnown RBP12.06□□□□□ -0.48
VPREB3-201ENST00000248948 TSC22D4Q9Y3Q8 395 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 MYO18BQ8IUG5 2567 aa12.06□□□□□ -0.48
VPREB3-201ENST00000248948 TENM4Q6N022 2769 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 LRIT2A6NDA9 550 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 A6NL46 340 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 MAGEB17A8MXT2 336 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 C4orf51C9J302 202 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 J3QKU1 62 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 E2F3O00716 465 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 ERI3O43414 337 aaKnown RBP12.05□□□□□ -0.48
VPREB3-201ENST00000248948 SMIM24O75264 130 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 FHP07954 510 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 HNRNPH1P31943 449 aaKnown RBP12.05□□□□□ -0.48
VPREB3-201ENST00000248948 HNF4AP41235 474 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 RAB8AP61006 207 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 EEF1A2Q05639 463 aaKnown RBP12.05□□□□□ -0.48
VPREB3-201ENST00000248948 TGM3Q08188 693 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 PCOLCEQ15113 449 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 MFSD4BQ5TF39 518 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 MED27Q6P2C8 311 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 QSOX2Q6ZRP7 698 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 RIPOR1Q6ZS17 1223 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 VN1R5Q7Z5H4 357 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 KBTBD2Q8IY47 623 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 TEX9Q8N6V9 391 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 OR2L5Q8NG80 312 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 OR5T3Q8NGG3 340 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 ACMSDQ8TDX5 336 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 CCT6BQ92526 530 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 C8orf44Q96CB5 159 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 MS4A6EQ96DS6 147 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 PEX11GQ96HA9 241 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 CCDC77Q9BR77 488 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 TUBB6Q9BUF5 446 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 NPLQ9BXD5 320 aaPredicted RBP12.05□□□□□ -0.48
VPREB3-201ENST00000248948 REXO4Q9GZR2 422 aaKnown RBP12.05□□□□□ -0.48
VPREB3-201ENST00000248948 AICDAQ9GZX7 198 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 ZNF552Q9H707 407 aaPredicted RBP12.05□□□□□ -0.48
VPREB3-201ENST00000248948 ANKZF1Q9H8Y5 726 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 LANCL2Q9NS86 450 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 ADGRE2Q9UHX3 823 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 ANGPTL3Q9Y5C1 460 aa12.05□□□□□ -0.48
VPREB3-201ENST00000248948 SYNDIG1LA6NDD5 238 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 PSMD12O00232 456 aaPredicted RBP12.04□□□□□ -0.48
VPREB3-201ENST00000248948 JRKO75564 520 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 SORBS2O94875 1100 aaKnown RBP12.04□□□□□ -0.48
VPREB3-201ENST00000248948 TBX6O95947 436 aaPredicted RBP12.04□□□□□ -0.48
VPREB3-201ENST00000248948 SERPINA7P05543 415 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 RNH1P13489 461 aaKnown RBP12.04□□□□□ -0.48
VPREB3-201ENST00000248948 RHAGQ02094 409 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 RAPSNQ13702 412 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 GTF2H2Q13888 395 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 RASA2Q15283 850 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 TMEM35AQ53FP2 167 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 AGAP7PQ5VUJ5 663 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 LIPJQ5W064 366 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 ADNP2Q6IQ32 1131 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 JMJD6Q6NYC1 403 aaPredicted RBP12.04□□□□□ -0.48
VPREB3-201ENST00000248948 GTF2H2CQ6P1K8 395 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 GOLGA7Q7Z5G4 137 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 PTGR2Q8N8N7 351 aaPredicted RBP12.04□□□□□ -0.48
VPREB3-201ENST00000248948 SRFBP1Q8NEF9 429 aaKnown RBP12.04□□□□□ -0.48
VPREB3-201ENST00000248948 REPS1Q96D71 796 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 FAR2Q96K12 515 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 SCYL1Q96KG9 808 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 AGAP4Q96P64 663 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 KCNC2Q96PR1 638 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 MESP1Q9BRJ9 268 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 MS4A8Q9BY19 250 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 RBCK1Q9BYM8 510 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 ROGDIQ9GZN7 287 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 KLHL31Q9H511 634 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 ACTR8Q9H981 624 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 COPS7BQ9H9Q2 264 aaPredicted RBP12.04□□□□□ -0.48
VPREB3-201ENST00000248948 ZNF358Q9NW07 568 aa12.04□□□□□ -0.48
VPREB3-201ENST00000248948 ZNF490Q9ULM2 529 aaPredicted RBP12.04□□□□□ -0.48
VPREB3-201ENST00000248948 H0YIV9 168 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 CHST10O43529 356 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 B3GALT2O43825 422 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 SCELO95171 688 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 SLU7O95391 586 aaKnown RBP12.03□□□□□ -0.48
VPREB3-201ENST00000248948 GSTA1P08263 222 aa12.03□□□□□ -0.48
VPREB3-201ENST00000248948 RPS17P08708 135 aaKnown RBP12.03□□□□□ -0.48
VPREB3-201ENST00000248948 ICAM2P13598 275 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms