RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 GALK2Q01415 458 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 BNIP3Q12983 259 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 NPTX1Q15818 432 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 NIPAL1Q6NVV3 410 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 ERN2Q76MJ5 926 aaKnown RBP12.8□□□□□ -0.36
COL1A1-201ENST00000225964 NRROSQ86YC3 692 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 TDRPQ86YL5 185 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 OR6N2Q8NGY6 317 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 RAD9AQ99638 391 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 CXorf21Q9HAI6 301 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 TELO2Q9Y4R8 837 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 J3QRK9 145 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 JUNDP17535 347 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 IL1R2P27930 398 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 MAGEA2P43356 314 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 SRYQ05066 204 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 OLIG2Q13516 323 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 OR4K14Q8NGD5 310 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 TRIM43Q96BQ3 446 aaPredicted RBP12.8□□□□□ -0.36
COL1A1-201ENST00000225964 TMCO6Q96DC7 493 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 PTCHD1Q96NR3 888 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 TMEM248Q9NWD8 314 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 GALPQ9UBC7 116 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 NOP16Q9Y3C1 178 aaKnown RBP12.8□□□□□ -0.36
COL1A1-201ENST00000225964 SLIT2O94813 1529 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 PCP4L1A6NKN8 68 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 HCRTR2O43614 444 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 SYPP08247 313 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 ZNF35P13682 527 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 MLLT1Q03111 559 aaPredicted RBP12.8□□□□□ -0.36
COL1A1-201ENST00000225964 FAM189A2Q15884 450 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 PLEKHG6Q3KR16 790 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 SLC35F1Q5T1Q4 408 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 UBQLNLQ8IYU4 475 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 FITM2Q8N6M3 262 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 C12orf42Q96LP6 360 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 HERC2P3Q9BVR0 1158 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 NLGN3Q9NZ94 848 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 GSKIPQ9P0R6 139 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 ITGB1BP2Q9UKP3 347 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 KCTD3Q9Y597 815 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 TMEM233B4DJY2 109 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 ARPC2O15144 300 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 SLC22A2O15244 555 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 KCNJ13O60928 360 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 EDNRBP24530 442 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 GNRHRP30968 328 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 OR4D2P58180 307 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 WSCD2Q2TBF2 565 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 TRMT10AQ8TBZ6 339 aaKnown RBP12.8□□□□□ -0.36
COL1A1-201ENST00000225964 TSACCQ96A04 125 aaPredicted RBP12.8□□□□□ -0.36
COL1A1-201ENST00000225964 PYURFQ96I23 114 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 CD244Q9BZW8 370 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 MAGEE1Q9HCI5 957 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 ZDHHC2Q9UIJ5 367 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 DISC1C4P0D8 188 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 M0R036 132 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 RAB28P51157 221 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 EEFSECP57772 596 aaKnown RBP12.8□□□□□ -0.36
COL1A1-201ENST00000225964 ADAM15Q13444 863 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 ZNF805Q5CZA5 627 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 C12orf76Q8N812 135 aaPredicted RBP12.8□□□□□ -0.36
COL1A1-201ENST00000225964 LRRC57Q8N9N7 239 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 THAP6Q8TBB0 222 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 TMEM68Q96MH6 324 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 ZIM2Q9NZV7 527 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 TMPRSS11EQ9UL52 423 aa12.8□□□□□ -0.36
COL1A1-201ENST00000225964 DCKP27707 260 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 PTCHD3Q3KNS1 767 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 TMEM198Q66K66 360 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 IRF2BP1Q8IU81 584 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 TICAM1Q8IUC6 712 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 MSLNLQ96KJ4 702 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 ALPK1Q96QP1 1244 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 TSSK6Q9BXA6 273 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 CAMTA1Q9Y6Y1 1673 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 A0A0D9SEW6 157 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 H0YJX3 145 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 S100A2P29034 98 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 SNU13P55769 128 aaKnown RBP12.79□□□□□ -0.36
COL1A1-201ENST00000225964 ROR2Q01974 943 aaKnown RBP12.79□□□□□ -0.36
COL1A1-201ENST00000225964 SLC36A4Q6YBV0 504 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 LINC00471Q8N535 108 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 OR8K3Q8NH51 312 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 RFT1Q96AA3 541 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 DEFB126Q9BYW3 111 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 STOX2Q9P2F5 926 aaPredicted RBP12.79□□□□□ -0.36
COL1A1-201ENST00000225964 ACSL5Q9ULC5 683 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 TULP2O00295 520 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 PAK4O96013 591 aaPredicted RBP12.79□□□□□ -0.36
COL1A1-201ENST00000225964 PDYNP01213 254 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 DAG1Q14118 895 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 ZNF792Q3KQV3 632 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 CLDN19Q8N6F1 224 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 TMEM234Q8WY98 164 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 SLC22A4Q9H015 551 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 DENND2DQ9H6A0 471 aaPredicted RBP12.79□□□□□ -0.36
COL1A1-201ENST00000225964 FBXL3Q9UKT7 428 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 SLC7A11Q9UPY5 501 aa12.79□□□□□ -0.36
COL1A1-201ENST00000225964 WDR45Q9Y484 360 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms