RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TM4SF18Q96CE8 201 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 TMEM168Q9H0V1 697 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 CHRDQ9H2X0 955 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 C6orf106Q9H6K1 298 aaPredicted RBP13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 SLC6A20Q9NP91 592 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 LHX9Q9NQ69 397 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 PNMA8BQ9ULN7 279 aaPredicted RBP13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 OAZ3Q9UMX2 235 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 PCDHGB4Q9UN71 923 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 SNX7Q9UNH6 387 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 ARHGAP10A1A4S6 786 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 UPK1AO00322 258 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 SMNDC1O75940 238 aaKnown RBP eCLIP13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 PRKD3O94806 890 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 CHRM5P08912 532 aaPredicted RBP13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 UBTFL6P0CB48 400 aaPredicted RBP13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 F3P13726 295 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 AK4P27144 223 aaPredicted RBP13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 CMPK1P30085 196 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 ACTR1BP42025 376 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 ACTR1AP61163 376 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 CYP4F2P78329 520 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 MC1RQ01726 317 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 GAB1Q13480 694 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 LRRC32Q14392 662 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 RGNQ15493 299 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 TMEM31Q5JXX7 168 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 ZCCHC8Q6NZY4 707 aaKnown RBP13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 UBE3DQ7Z6J8 389 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 NRROSQ86YC3 692 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 CHERPQ8IWX8 916 aaKnown RBP13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 ADGRF3Q8IZF5 1079 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 TRIML2Q8N7C3 387 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 FAM86B1Q8N7N1 296 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 FAM174AQ8TBP5 190 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 GPBAR1Q8TDU6 330 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 LCN9Q8WX39 176 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 NCLNQ969V3 563 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 SLC47A1Q96FL8 570 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 NTN4Q9HB63 628 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 WSB2Q9NYS7 404 aaPredicted RBP13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 PDP2Q9P2J9 529 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 SPASTQ9UBP0 616 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 DNAJB9Q9UBS3 223 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 DUSP12Q9UNI6 340 aa13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 SAMD4AQ9UPU9 718 aaKnown RBP13.67□□□□□ -0.22
RTFDC1-201ENST00000023939 PRAMEF33A0A0G2JMD5 474 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 LRIT2A6NDA9 550 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 DLGAP1O14490 977 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 RASGRP1O95267 797 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 SERPINA1P01009 418 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 BCL6P41182 706 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 SLC19A1P41440 591 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 MVDP53602 400 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 HBA1P69905 142 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 HEPACAMQ14CZ8 416 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 C6orf52Q5T4I8 152 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 RD3Q7Z3Z2 195 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 CARM1Q86X55 608 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 OR13H1Q8NG92 308 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 FBXO30Q8TB52 745 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 TFAP2CQ92754 450 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 SLC22A18Q96BI1 424 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 TOE1Q96GM8 510 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 PYURFQ96I23 114 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 SORBS1Q9BX66 1292 aaKnown RBP13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 TRIM4Q9C037 500 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 MIEF1Q9NQG6 463 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 SPHK1Q9NYA1 384 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 TAS2R9Q9NYW1 312 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 TAS2R7Q9NYW3 318 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 UBAP1Q9NZ09 502 aa13.66□□□□□ -0.22
RTFDC1-201ENST00000023939 A0A0A6YYD5 115 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 SCAMP1O15126 338 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 C6orf47O95873 294 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 TNFP01375 233 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 C1QCP02747 245 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 CD6P30203 668 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 KDELR2P33947 212 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 PCGF2P35227 344 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 FRKP42685 505 aaPredicted RBP13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 MAGEA2P43356 314 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 ILF3Q12906 894 aaKnown RBP eCLIP13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 FADDQ13158 208 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 KIR2DS3Q14952 304 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 PRSS53Q2L4Q9 553 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 LEXMQ3ZCV2 418 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 OR4C11Q6IEV9 310 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 OR52E8Q6IFG1 317 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 ADCK2Q7Z695 626 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 FBXL6Q8N531 539 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 MFSD9Q8NBP5 474 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 OR52N2Q8NGI0 321 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 CCL4L1Q8NHW4 92 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 TBC1D20Q96BZ9 403 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 DPH7Q9BTV6 452 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 ANKRD60Q9BZ19 345 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 SLC6A16Q9GZN6 736 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 RAD21L1Q9H4I0 556 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 DLGAP2Q9P1A6 1054 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms