RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Nme5Q99MH5 211 aa8.72□□□□□ -1.01
Upf3b-201ENSMUST00000076265 LbhQ9CX60 105 aa8.72□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Pex13Q9D0K1 405 aa8.72□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Rwdd2aQ9D9S3 292 aa8.72□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Clca3a2Q9EQR4 902 aa8.72□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Hes6Q9JHE6 224 aa8.72□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Clca3a1Q9QX15 902 aa8.72□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Sfrp5Q9WU66 314 aa8.72□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Col3a1P08121 1464 aa8.72□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Kiaa0232Q80U59 1396 aaKnown RBP8.72□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Dmrta2A2A9A2 531 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Samt3A2ARK7 233 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Fam171a1A2ATK9 892 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Vmn2r24D3YUI0 854 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Vmn1r160E9Q346 307 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Olfr237-ps1K9J725 310 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Vmn1r123L7N270 307 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 PtgdsO09114 189 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Ctnnal1O88327 731 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 P06336 421 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Gh1P06880 216 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Wnt3P17553 355 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Syt1P46096 421 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Slc1a3P56564 543 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Entpd7Q3TCT4 606 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Q3TYS2 187 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Spata6Q3U6K5 488 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Parp8Q3UD82 852 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Wbp4Q61048 376 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Ifi47Q61635 420 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Nlgn2Q69ZK9 836 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Doxl2Q6IMK7 723 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 DdiasQ6NZG4 898 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Clec18aQ7TSQ1 534 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Sirt7Q8BKJ9 402 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 BC024139Q8BVJ3 772 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 MtrrQ8C1A3 696 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 4932414N04RikQ8CEQ9 752 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Il19Q8CJ70 176 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Alkbh3Q8K1E6 286 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Med25Q8VCB2 745 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Asb15Q8VHS6 583 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Wrnip1Q91XU0 660 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Fam118aQ91YN1 357 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Gtpbp3Q923K4 492 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 NamptQ99KQ4 491 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Slc25a2Q99ML6 265 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Glod4Q9CPV4 298 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Prl8a9Q9CQ58 241 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Apopt1Q9CQW7 192 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Gstt4Q9D4P7 240 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Q9D5Y0 588 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Armc1Q9D7A8 282 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Eif3kQ9DBZ5 218 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Smad9Q9JIW5 430 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Sytl4Q9R0Q1 673 aa8.71□□□□□ -1.01
Upf3b-201ENSMUST00000076265 Gm37596A0A0A6YXL2 336 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Cylc1A0A1B0GR13 642 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Fam83cA2ARK0 776 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Vmn1r149E9PWL6 307 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Vmn1r101E9Q365 307 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Ifi207E9Q3L4 978 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Tmem44E9Q4M0 433 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 H2-T10F6T1I5 379 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Fpr-s1O08790 351 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Papss2O88428 621 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 DdcO88533 480 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Fpr2O88536 351 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Mov10P23249 1004 aaKnown RBP8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 CryabP23927 175 aaKnown RBP8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Uck1P52623 277 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 RidaP52760 135 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Dbx1P52950 335 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 RhodP97348 210 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Ext1P97464 746 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 GabpaQ00422 454 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 SpoplQ2M2N2 392 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Tmem102Q3UPR7 509 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 ItgadQ3V0T4 1168 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Xrcc1Q60596 631 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 IppkQ6P1C1 489 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Ubfd1Q78JW9 368 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Celf6Q7TN33 460 aaKnown RBP8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Vtcn1Q7TSP5 283 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Zar1Q80SU3 361 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Trim50Q810I2 483 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Krt75Q8BGZ7 551 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Fbxw21Q8BI38 468 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Cfap20Q8BTU1 193 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Ctdsp2Q8BX07 270 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Arhgap24Q8C4V1 747 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Dmrtc2Q8CGW9 370 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Mmp21Q8K3F2 568 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Neil1Q8K4Q6 389 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Taf6lQ8R2K4 616 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Zfp709Q8VC29 727 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Pla2g15Q8VEB4 412 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr816Q8VFU2 312 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr508Q8VG42 310 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Adipor1Q91VH1 375 aa8.71□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms