RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 STMN1P16949 149 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 ALOX12P18054 663 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 KCNC1P48547 511 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 HSPA7P48741 367 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 RHAGQ02094 409 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 PWP1Q13610 501 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 SLMAPQ14BN4 828 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 FCRLBQ6BAA4 426 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 C8orf74Q6P047 294 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 SLCO4C1Q6ZQN7 724 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 CPEB2Q7Z5Q1 589 aaKnown RBP16.71■□□□□ 0.27
PNKP-230ENST00000638016 ZGRF1Q86YA3 2104 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 CREB3L4Q8TEY5 395 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 MAGEB10Q96LZ2 347 aaPredicted RBP16.71■□□□□ 0.27
PNKP-230ENST00000638016 AIF1LQ9BQI0 150 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 SLC6A16Q9GZN6 736 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 ZDHHC18Q9NUE0 388 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 WWOXQ9NZC7 414 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 COPG1Q9Y678 874 aaKnown RBP16.71■□□□□ 0.27
PNKP-230ENST00000638016 KCNE2Q9Y6J6 123 aa16.71■□□□□ 0.27
PNKP-230ENST00000638016 CHST10O43529 356 aa16.7■□□□□ 0.26
PNKP-230ENST00000638016 SLC35E2BP0CK96 405 aa16.7■□□□□ 0.26
PNKP-230ENST00000638016 RAB10P61026 200 aa16.7■□□□□ 0.26
PNKP-230ENST00000638016 GUCY2DQ02846 1103 aa16.7■□□□□ 0.26
PNKP-230ENST00000638016 RGS1Q08116 209 aa16.7■□□□□ 0.26
PNKP-230ENST00000638016 CDC16Q13042 620 aa16.7■□□□□ 0.26
PNKP-230ENST00000638016 BMPR2Q13873 1038 aa16.7■□□□□ 0.26
PNKP-230ENST00000638016 SLBPQ14493 270 aaKnown RBP eCLIP16.7■□□□□ 0.26
PNKP-230ENST00000638016 ZNF169Q14929 603 aaPredicted RBP16.7■□□□□ 0.26
PNKP-230ENST00000638016 ABRAXAS2Q15018 415 aa16.7■□□□□ 0.26
PNKP-230ENST00000638016 HERC3Q15034 1050 aa16.7■□□□□ 0.26
PNKP-230ENST00000638016 TOR1AIP1Q5JTV8 583 aa16.7■□□□□ 0.26
PNKP-230ENST00000638016 GPSM1Q86YR5 675 aa16.7■□□□□ 0.26
PNKP-230ENST00000638016 KLHDC8AQ8IYD2 350 aa16.7■□□□□ 0.26
PNKP-230ENST00000638016 PRR7Q8TB68 274 aa16.7■□□□□ 0.26
PNKP-230ENST00000638016 METTL21AQ8WXB1 218 aa16.7■□□□□ 0.26
PNKP-230ENST00000638016 ZNF592Q92610 1267 aa16.7■□□□□ 0.26
PNKP-230ENST00000638016 TSPAN17Q96FV3 270 aa16.7■□□□□ 0.26
PNKP-230ENST00000638016 FAM227AF5H4B4 570 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 MAN1A2O60476 641 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 B4GALT2O60909 372 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 AGFG2O95081 481 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 CBX6O95503 412 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 UQCRHP07919 91 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 GSTA2P09210 222 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 C1GALT1C1LP0DN25 315 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 AHRP35869 848 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 HNMTP50135 292 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 ARG2P78540 354 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 BTG2P78543 158 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 IRF9Q00978 393 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 CAV1Q03135 178 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 CKAP4Q07065 602 aaKnown RBP16.69■□□□□ 0.26
PNKP-230ENST00000638016 BTBD16Q32M84 506 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 HIST2H2BCQ6DN03 193 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 CYS1Q717R9 158 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 VN1R5Q7Z5H4 357 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 NOA1Q8NC60 698 aaKnown RBP16.69■□□□□ 0.26
PNKP-230ENST00000638016 OR1N1Q8NGS0 311 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 GRHL3Q8TE85 626 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 UBXN10Q96LJ8 280 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 LMF1Q96S06 567 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 TUBB6Q9BUF5 446 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 FAM129AQ9BZQ8 928 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 PHACTR1Q9C0D0 580 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 RHBGQ9H310 441 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 ALG9Q9H6U8 611 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 POLEQ07864 2286 aa16.69■□□□□ 0.26
PNKP-230ENST00000638016 E2F3O00716 465 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 WFS1O76024 890 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 WDPCPO95876 746 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 TBX6O95947 436 aaPredicted RBP16.68■□□□□ 0.26
PNKP-230ENST00000638016 FHP07954 510 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 SMIM10L1P0DMW3 83 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 EPORP19235 508 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 CD22P20273 847 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 HNRNPH1P31943 449 aaKnown RBP16.68■□□□□ 0.26
PNKP-230ENST00000638016 STX2P32856 288 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 SPRP35270 261 aaPredicted RBP16.68■□□□□ 0.26
PNKP-230ENST00000638016 TLR1Q15399 786 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 SFT2D3Q587I9 215 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 GRTP1Q5TC63 336 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 FHL5Q5TD97 284 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 PAPD4Q6PIY7 484 aaKnown RBP16.68■□□□□ 0.26
PNKP-230ENST00000638016 RAPH1Q70E73 1250 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 TBC1D19Q8N5T2 526 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 TBC1D20Q96BZ9 403 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 SMIM10Q96HG1 83 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 BARD1Q99728 777 aaKnown RBP16.68■□□□□ 0.26
PNKP-230ENST00000638016 NPAS2Q99743 824 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 SLC29A3Q9BZD2 475 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 IGSF5Q9NSI5 407 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 CD274Q9NZQ7 290 aa16.68■□□□□ 0.26
PNKP-230ENST00000638016 DMGDHQ9UI17 866 aaKnown RBP16.68■□□□□ 0.26
PNKP-230ENST00000638016 HMX2A2RU54 273 aa16.67■□□□□ 0.26
PNKP-230ENST00000638016 A8MUI8 341 aa16.67■□□□□ 0.26
PNKP-230ENST00000638016 GNAZP19086 355 aa16.67■□□□□ 0.26
PNKP-230ENST00000638016 TFEBP19484 476 aa16.67■□□□□ 0.26
PNKP-230ENST00000638016 MAOAP21397 527 aa16.67■□□□□ 0.26
PNKP-230ENST00000638016 TSFMP43897 325 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms