RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 HOXA6P31267 233 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 NEK2P51955 445 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 VSX2P58304 361 aaPredicted RBP11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 RPL38P63173 70 aaKnown RBP11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 SPDYE7PQ495Y7 208 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 IRAK1BP1Q5VVH5 260 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 TRIM40Q6P9F5 258 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 SLC22A18ASQ8N1D0 253 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 FAM192AQ9GZU8 254 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 SLC24A3Q9HC58 644 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 SERTAD3Q9UJW9 196 aa11.96□□□□□ -0.49
SYNGAP1-207ENST00000628646 CTSKP43235 329 aa11.96□□□□□ -0.5
SYNGAP1-207ENST00000628646 ERVK-8P63133 956 aa11.96□□□□□ -0.5
SYNGAP1-207ENST00000628646 SPATS1Q496A3 300 aa11.96□□□□□ -0.5
SYNGAP1-207ENST00000628646 MINDY4Q4G0A6 757 aa11.96□□□□□ -0.5
SYNGAP1-207ENST00000628646 XKR7Q5GH72 579 aa11.96□□□□□ -0.5
SYNGAP1-207ENST00000628646 TBCELQ5QJ74 424 aa11.96□□□□□ -0.5
SYNGAP1-207ENST00000628646 SLC13A3Q8WWT9 602 aa11.96□□□□□ -0.5
SYNGAP1-207ENST00000628646 TEX37Q96LM6 180 aa11.96□□□□□ -0.5
SYNGAP1-207ENST00000628646 QRFPRQ96P65 431 aa11.96□□□□□ -0.5
SYNGAP1-207ENST00000628646 SDR39U1Q9NRG7 319 aaPredicted RBP11.96□□□□□ -0.5
SYNGAP1-207ENST00000628646 ATXN7L1Q9ULK2 861 aaPredicted RBP11.96□□□□□ -0.5
SYNGAP1-207ENST00000628646 RAB26Q9ULW5 256 aa11.96□□□□□ -0.5
SYNGAP1-207ENST00000628646 AK5Q9Y6K8 562 aa11.96□□□□□ -0.5
SYNGAP1-207ENST00000628646 FLRT2O43155 660 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 AHCYL1O43865 530 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 SOD1P00441 154 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 IGLV3-19P01714 112 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 PABPC4LP0CB38 370 aaKnown RBP11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 HOXB6P17509 224 aaKnown RBP11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 NOVA1P51513 510 aaKnown RBP11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 SLC7A2P52569 658 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 LIN52Q52LA3 116 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 ZC3H12BQ5HYM0 836 aaKnown RBP11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 FIGLAQ6QHK4 219 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 ZBTB49Q6ZSB9 765 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 PAGE2Q7Z2X7 111 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 METTL25Q8N6Q8 603 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 GFM2Q969S9 779 aaKnown RBP11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 COL26A1Q96A83 441 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 LOXL4Q96JB6 756 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 CACYBPQ9HB71 228 aaKnown RBP11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 RNF11Q9Y3C5 154 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 IGLV3-16A0A075B6K0 115 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 SLC9B1P1A6NJY1 282 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 NME4O00746 187 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 TFAP2AP05549 437 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 HOXC4P09017 264 aaPredicted RBP11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 VARSP26640 1264 aaKnown RBP11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 S100A3P33764 101 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 GPC1P35052 558 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 ZNF438Q7Z4V0 828 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 OR4F6Q8NGB9 312 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 IFI44Q8TCB0 444 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 VPS33AQ96AX1 596 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 C1orf50Q9BV19 199 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 GPN3Q9UHW5 284 aaPredicted RBP11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 GPR45Q9Y5Y3 372 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 A0A1B0GTQ1 180 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 DLGAP1O14490 977 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 E2F6O75461 281 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 MATN4O95460 622 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 CHN2P52757 468 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 RAB8AP61006 207 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 PGS1Q32NB8 556 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 DEFB124Q8NES8 71 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 RHBDF1Q96CC6 855 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 FBXL8Q96CD0 374 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 ZNF382Q96SR6 550 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 NDC1Q9BTX1 674 aa11.95□□□□□ -0.5
SYNGAP1-207ENST00000628646 FEZF1A0PJY2 475 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 TLX1P31314 330 aaPredicted RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 ZNF528Q3MIS6 628 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 OR2T11Q8NH01 316 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 RSC1A1Q92681 617 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 ZNF597Q96LX8 424 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 TSC22D3Q99576 134 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 CDC6Q99741 560 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 OR52A5Q9H2C5 316 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 C8orf4Q9NR00 106 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 ZIM2Q9NZV7 527 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 NEUROG3Q9Y4Z2 214 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 ENTPD2Q9Y5L3 495 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 PIEZO1Q92508 2521 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 C5orf42Q9H799 3197 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 SHISA7A6NL88 538 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 ENO4A6NNW6 628 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 KCNH1O95259 989 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 CHRM5P08912 532 aaPredicted RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 ATP6V1B2P21281 511 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 SOAT1P35610 550 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 POLR2JP52435 117 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 STXBP1P61764 594 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 APOFQ13790 326 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 CAPRIN1Q14444 709 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 AGERQ15109 404 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 CNPY1Q3B7I2 92 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 C6orf132Q5T0Z8 1188 aa11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 CHERPQ8IWX8 916 aaKnown RBP11.94□□□□□ -0.5
SYNGAP1-207ENST00000628646 GALNT15Q8N3T1 639 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms