RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 HNMTP50135 292 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 REEP5Q00765 189 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 PWP1Q13610 501 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 MINDY4Q4G0A6 757 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 NXPE4Q6UWF7 544 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 ISLR2Q6UXK2 745 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 FRA10AC1Q70Z53 315 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 TMPRSS11BQ86T26 416 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 ANKRD53Q8N9V6 530 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 OR5T3Q8NGG3 340 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 DNAJB14Q8TBM8 379 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 NT5CQ8TCD5 201 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 BRIX1Q8TDN6 353 aaKnown RBP16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 PPP4R1Q8TF05 950 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 TSPAN17Q96FV3 270 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 IMMP1LQ96LU5 166 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 LMF1Q96S06 567 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 PPCSQ9HAB8 311 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 PELI2Q9HAT8 420 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 ASF1BQ9NVP2 202 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 ZFP69BQ9UJL9 534 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 PCDHGA10Q9Y5H3 936 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 KCNE2Q9Y6J6 123 aa16.96■□□□□ 0.31
SCAMP4-213ENST00000621748 HIVEP3Q5T1R4 2406 aa16.96■□□□□ 0.3
SCAMP4-213ENST00000621748 IGHV3-20A0A0C4DH32 117 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 NCF1BA6NI72 391 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 NCF1CA8MVU1 366 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 KRT38O76015 456 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 SERPINA7P05543 415 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 NCF1P14598 390 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 CD1DP15813 335 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 STMN1P16949 149 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 VARSP26640 1264 aaKnown RBP16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 AHRP35869 848 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 HSD17B3P37058 310 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 SLC6A12P48065 614 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 GLRBP48167 497 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 SERPINB9P50453 376 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 MFAP5Q13361 173 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 HERC3Q15034 1050 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 TGFBIQ15582 683 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 ZKSCAN8Q15776 578 aaPredicted RBP16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 MFSD4BQ5TF39 518 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 LANCL3Q6ZV70 420 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 KLHDC8AQ8IYD2 350 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 FAM26EQ8N5C1 309 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 TBC1D19Q8N5T2 526 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 METTL21AQ8WXB1 218 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 AIF1LQ9BQI0 150 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 EPS8L2Q9H6S3 715 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 RIC8BQ9NVN3 520 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 PTGFRNQ9P2B2 879 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 NTNG1Q9Y2I2 539 aa16.95■□□□□ 0.3
SCAMP4-213ENST00000621748 SVILO95425 2214 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 TAPBPO15533 448 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 GALR3O60755 368 aaPredicted RBP16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 WDR47O94967 919 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 ZNF888P0CJ79 500 aaPredicted RBP16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 ALOX12P18054 663 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 CNTFP26441 200 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 SOX11P35716 441 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 RAB10P61026 200 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 HYAL2Q12891 473 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 MRPL49Q13405 166 aaKnown RBP16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 RBBP5Q15291 538 aaKnown RBP16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 OR4D1Q15615 310 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 DEFB134Q4QY38 66 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 FBXO48Q5FWF7 155 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 SIRT6Q8N6T7 355 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 CATSPER1Q8NEC5 780 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 PEX11GQ96HA9 241 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 CNDP1Q96KN2 507 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 UBXN10Q96LJ8 280 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 FUT8Q9BYC5 575 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 RBCK1Q9BYM8 510 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 TXLNGYQ9BZA5 131 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 LANCL2Q9NS86 450 aa16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 COPG1Q9Y678 874 aaKnown RBP16.94■□□□□ 0.3
SCAMP4-213ENST00000621748 USP9YO00507 2555 aaPredicted RBP16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 CPAMD8Q8IZJ3 1885 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 CDC123O75794 336 aaPredicted RBP16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 C1GALT1C1LP0DN25 315 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 ITGAMP11215 1152 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 HNF4AP41235 474 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 ATP6V0D1P61421 351 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 OLR1P78380 273 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 RHAGQ02094 409 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 RGS1Q08116 209 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 EFTUD2Q15029 972 aaKnown RBP eCLIP16.93■□□□□ 0.34e-6■■■□□ 19.2
SCAMP4-213ENST00000621748 B3GNTL1Q67FW5 361 aaPredicted RBP16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 SLCO4C1Q6ZQN7 724 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 RIPOR1Q6ZS17 1223 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 CPEB2Q7Z5Q1 589 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 ANKRD37Q7Z713 158 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 CROCCP2Q86T23 111 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 GPSM1Q86YR5 675 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 MREGQ8N565 214 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 TRPV3Q8NET8 790 aa16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 UTP15Q8TED0 518 aaKnown RBP16.93■□□□□ 0.3
SCAMP4-213ENST00000621748 CREB3L4Q8TEY5 395 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms