RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 SPIDRQ14159 915 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 TRIP6Q15654 476 aaKnown RBP7.65□□□□□ -1.18
CPNE3-209ENST00000620393 GSTA3Q16772 222 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 OTOGLQ3ZCN5 2332 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 GALNTL6Q49A17 601 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 TCTE1Q5JU00 501 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 WASHC2DQ5SRD0 308 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 TMTC4Q5T4D3 741 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 IL23RQ5VWK5 629 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 TMEM198Q66K66 360 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 GALNT18Q6P9A2 607 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 UBE3DQ7Z6J8 389 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 ALYREFQ86V81 257 aaKnown RBP7.65□□□□□ -1.18
CPNE3-209ENST00000620393 SLITRK4Q8IW52 837 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 FNDC5Q8NAU1 212 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 SRFBP1Q8NEF9 429 aaKnown RBP7.65□□□□□ -1.18
CPNE3-209ENST00000620393 RGMAQ96B86 450 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 MS4A6EQ96DS6 147 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 SMIM10Q96HG1 83 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 FCRL1Q96LA6 429 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 LRRC37BQ96QE4 947 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 MACROD1Q9BQ69 325 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 CENPKQ9BS16 269 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 REXO4Q9GZR2 422 aaKnown RBP7.65□□□□□ -1.18
CPNE3-209ENST00000620393 AICDAQ9GZX7 198 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 ZMYND15Q9H091 742 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 MYLK2Q9H1R3 596 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 KLHL31Q9H511 634 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 ZNF768Q9H5H4 540 aaKnown RBP7.65□□□□□ -1.18
CPNE3-209ENST00000620393 ENAMQ9NRM1 1142 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 SOHLH2Q9NX45 425 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 ASIC5Q9NY37 505 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 G3BP2Q9UN86 482 aaKnown RBP7.65□□□□□ -1.18
CPNE3-209ENST00000620393 EIF3LQ9Y262 564 aaKnown RBP7.65□□□□□ -1.18
CPNE3-209ENST00000620393 RUVBL1Q9Y265 456 aaKnown RBP7.65□□□□□ -1.18
CPNE3-209ENST00000620393 TMED5Q9Y3A6 229 aa7.65□□□□□ -1.18
CPNE3-209ENST00000620393 GOLGA4Q13439 2230 aaKnown RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 URADA6NGE7 173 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 D6RAR5 112 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 TMX2-CTNND1H3BSU7 103 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 SAP18O00422 153 aaKnown RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 FCHO1O14526 889 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 TM4SF5O14894 197 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 RRP9O43818 475 aaKnown RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 MYO1DO94832 1006 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 KLHL18O94889 574 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 STATHP02808 62 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 EIF2S1P05198 315 aaKnown RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 ALDOCP09972 364 aaKnown RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 SLC35G6P0C7Q6 338 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 CDK4P11802 303 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 PRPS2P11908 318 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 BCKDHAP12694 445 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 IDO1P14902 403 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 ACPPP15309 386 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 FOLR1P15328 257 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 HNRNPH1P31943 449 aaKnown RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 BSGP35613 385 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 MRPL19P49406 292 aaKnown RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 ATP4BP51164 291 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 RAP1GDS1P52306 607 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 DIO3P55073 304 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 VSX2P58304 361 aaPredicted RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 RPL38P63173 70 aaKnown RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 RAE1P78406 368 aaKnown RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 TGM3Q08188 693 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 ACSM2AQ08AH3 577 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 RPS6KA2Q15349 733 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 PRTGQ2VWP7 1150 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 SPIN4Q56A73 249 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 TOR1AIP1Q5JTV8 583 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 ACSM2BQ68CK6 577 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 OR4C11Q6IEV9 310 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 NOXRED1Q6NXP6 359 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 ABHD17CQ6PCB6 329 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 C6orf89Q6UWU4 347 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 FITM2Q8N6M3 262 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 C1orf52Q8N6N3 182 aaKnown RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 ZNF655Q8N720 491 aaPredicted RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 CSNK1A1LQ8N752 337 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 KCT2Q8NC54 265 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 OR2L5Q8NG80 312 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 UTP15Q8TED0 518 aaKnown RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 CCDC74BQ96LY2 380 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 TMEM74Q96NL1 305 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 CATSPER2Q96P56 530 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 QRFPRQ96P65 431 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 TBCDQ9BTW9 1192 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 MRPL1Q9BYD6 325 aaKnown RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 NLNQ9BYT8 704 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 NMUR2Q9GZQ4 415 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 SPRTNQ9H040 489 aaPredicted RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 ZNF385DQ9H6B1 395 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 SYNDIG1Q9H7V2 258 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 DDX31Q9H8H2 851 aaKnown RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 PRDM7Q9NQW5 492 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 MRGBPQ9NV56 204 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 AIG1Q9NVV5 245 aa7.64□□□□□ -1.19
CPNE3-209ENST00000620393 NOP53Q9NZM5 478 aaKnown RBP7.64□□□□□ -1.19
CPNE3-209ENST00000620393 SERTAD3Q9UJW9 196 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms