RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 CBLL1Q75N03 491 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 HIPK1Q86Z02 1210 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 C8orf59Q8N0T1 100 aaPredicted RBP13.06□□□□□ -0.32
NEK3-205ENST00000610828 NAGSQ8N159 534 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 OR14C36Q8NHC7 312 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 TPD52L3Q96J77 140 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 MPP4Q96JB8 637 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 HSH2DQ96JZ2 352 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 MBOAT4Q96T53 435 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 AMBRA1Q9C0C7 1298 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 MKRN2Q9H000 416 aaKnown RBP13.06□□□□□ -0.32
NEK3-205ENST00000610828 CHST8Q9H2A9 424 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 MYNNQ9NPC7 610 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 FBXL12Q9NXK8 326 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 VNN3Q9NY84 501 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 PTTG2Q9NZH5 202 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 MSRAQ9UJ68 235 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 C3orf18Q9UK00 162 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 BAG5Q9UL15 447 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 WDR37Q9Y2I8 494 aa13.06□□□□□ -0.32
NEK3-205ENST00000610828 K7EQS6 105 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 KLHL18O94889 574 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 FUCA1P04066 466 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 IL3P08700 152 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 RPL3P39023 403 aaKnown RBP13.05□□□□□ -0.32
NEK3-205ENST00000610828 VLDLRP98155 873 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 KCNAB2Q13303 367 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 LAPTM4AQ15012 233 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 CWF19L1Q69YN2 538 aaKnown RBP13.05□□□□□ -0.32
NEK3-205ENST00000610828 FAM71E1Q6IPT2 247 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 ZNF852Q6ZMS4 543 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 EIF3MQ7L2H7 374 aaKnown RBP13.05□□□□□ -0.32
NEK3-205ENST00000610828 THAP5Q7Z6K1 395 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 ARL10Q8N8L6 244 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 PJA1Q8NG27 643 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 ZFAND2BQ8WV99 257 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 C12orf66Q96MD2 445 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 AIF1LQ9BQI0 150 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 SLC35A5Q9BS91 424 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 SPATA9Q9BWV2 254 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 ASPSCR1Q9BZE9 553 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 SLC6A17Q9H1V8 727 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 PHPT1Q9NRX4 125 aaPredicted RBP13.05□□□□□ -0.32
NEK3-205ENST00000610828 IFT80Q9P2H3 777 aaPredicted RBP13.05□□□□□ -0.32
NEK3-205ENST00000610828 MOSPD1Q9UJG1 213 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 FEZF1A0PJY2 475 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 TRIM64CA6NLI5 447 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 H7BY64 318 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 EEF1B2P24534 225 aaKnown RBP13.05□□□□□ -0.32
NEK3-205ENST00000610828 KIR2DL1P43626 348 aaPredicted RBP13.05□□□□□ -0.32
NEK3-205ENST00000610828 ESRRGP62508 458 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 RPS21P63220 83 aaKnown RBP13.05□□□□□ -0.32
NEK3-205ENST00000610828 LSAMPQ13449 338 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 PDE7AQ13946 482 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 AGERQ15109 404 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 MPEG1Q2M385 716 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 OR2T5Q6IEZ7 315 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 TMEM26Q6ZUK4 368 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 SLC9B2Q86UD5 537 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 ANKRD53Q8N9V6 530 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 TP53I13Q8NBR0 393 aaPredicted RBP13.05□□□□□ -0.32
NEK3-205ENST00000610828 OR2T29Q8NH02 315 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 EZH1Q92800 747 aaPredicted RBP13.05□□□□□ -0.32
NEK3-205ENST00000610828 PRAP1Q96NZ9 151 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 FERD3LQ96RJ6 166 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 MENTQ9BUN1 341 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 MIEF1Q9NQG6 463 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 LMCD1Q9NZU5 365 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 RSL24D1Q9UHA3 163 aaKnown RBP13.05□□□□□ -0.32
NEK3-205ENST00000610828 ACSL5Q9ULC5 683 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 KCNK6Q9Y257 313 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 ORC6Q9Y5N6 252 aa13.05□□□□□ -0.32
NEK3-205ENST00000610828 GPR89AB7ZAQ6 455 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 RTCAO00442 366 aaKnown RBP13.04□□□□□ -0.32
NEK3-205ENST00000610828 B4GAT1O43505 415 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 GPR89BP0CG08 455 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 CXCR2P25025 360 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 MAT2AP31153 395 aaKnown RBP13.04□□□□□ -0.32
NEK3-205ENST00000610828 HSD17B2P37059 387 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 ARHGDIAP52565 204 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 BIRC2Q13490 618 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 COX20Q5RI15 118 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 FAM180BQ6P0A1 224 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 SHQ1Q6PI26 577 aaKnown RBP13.04□□□□□ -0.32
NEK3-205ENST00000610828 EP400NLQ6ZTU2 488 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 LPCAT2Q7L5N7 544 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 GPR141Q7Z602 305 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 HORMAD1Q86X24 394 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 MMP21Q8N119 569 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 C11orf65Q8NCR3 313 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 OR5AK3PQ8NH89 298 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 GOT1L1Q8NHS2 421 aaPredicted RBP13.04□□□□□ -0.32
NEK3-205ENST00000610828 SMPDL3AQ92484 453 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 YTHDF1Q9BYJ9 559 aaKnown RBP13.04□□□□□ -0.32
NEK3-205ENST00000610828 ADNPQ9H2P0 1102 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 TM9SF3Q9HD45 589 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 IMP3Q9NV31 184 aaKnown RBP13.04□□□□□ -0.32
NEK3-205ENST00000610828 GPATCH2Q9NW75 528 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 AHSPQ9NZD4 102 aa13.04□□□□□ -0.32
NEK3-205ENST00000610828 ACSL6Q9UKU0 697 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms