RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 LMAN1LQ9HAT1 526 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 TAS2R9Q9NYW1 312 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 C5AR2Q9P296 337 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 ACSL6Q9UKU0 697 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 CA5BQ9Y2D0 317 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 IRAK3Q9Y616 596 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 NUMBLQ9Y6R0 609 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 HMX2A2RU54 273 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 MCIDASD6RGH6 385 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 KRT8P05787 483 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 RPS17P08708 135 aaKnown RBP7.01□□□□□ -1.29
CSDE1-218ENST00000610726 ALOX5P09917 674 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 CCDC159P0C7I6 412 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 PTNP21246 168 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 HNRNPA2B1P22626 353 aaKnown RBP7.01□□□□□ -1.29
CSDE1-218ENST00000610726 PCYT1AP49585 367 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 CDH15P55291 814 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 OR4D2P58180 307 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 RPS26P62854 115 aaKnown RBP7.01□□□□□ -1.29
CSDE1-218ENST00000610726 PCDH1Q08174 1060 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 RAPSNQ13702 412 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 BLMHQ13867 455 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 C9orf50Q5SZB4 431 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 ARMC4Q5T2S8 1044 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 RTL10Q7L3V2 364 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 ERMP1Q7Z2K6 904 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 RANBP3LQ86VV4 465 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-218ENST00000610726 MFSD6LQ8IWD5 586 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 SLC22A15Q8IZD6 547 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 CLECL1Q8IZS7 167 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 AMER2Q8N7J2 671 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 OR8K5Q8NH50 307 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 PIGKQ92643 395 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 TP53INP1Q96A56 240 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 DGCR14Q96DF8 476 aaKnown RBP7.01□□□□□ -1.29
CSDE1-218ENST00000610726 UBXN10Q96LJ8 280 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 IL4I1Q96RQ9 567 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 NODALQ96S42 347 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 GPATCH1Q9BRR8 931 aaKnown RBP7.01□□□□□ -1.29
CSDE1-218ENST00000610726 KCNH6Q9H252 994 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 MVB12BQ9H7P6 319 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 RHCGQ9UBD6 479 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 COPS7AQ9UBW8 275 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 MRPS7Q9Y2R9 242 aaKnown RBP7.01□□□□□ -1.29
CSDE1-218ENST00000610726 SEC16AO15027 2179 aa7.01□□□□□ -1.29
CSDE1-218ENST00000610726 FGF4P08620 206 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 DRD1P21728 446 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 MASP1P48740 699 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 SLAMF1Q13291 335 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 ELOCQ15369 112 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 UAP1L1Q3KQV9 507 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 ARMCX4Q5H9R4 360 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 ZNF311Q5JNZ3 666 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 WDR45BQ5MNZ6 344 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 CLEC12AQ5QGZ9 265 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 KIAA1161Q6NSJ0 714 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 RASGEF1AQ8N9B8 481 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 PIGXQ8TBF5 258 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 LKAAEAR1Q8TD35 194 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 NEIL2Q969S2 332 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 FBXL8Q96CD0 374 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 C1GALT1C1Q96EU7 318 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 PYURFQ96I23 114 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 HHIPQ96QV1 700 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 PBX4Q9BYU1 374 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 GIN1Q9NXP7 522 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 CPSF4LA6NMK7 179 aaKnown RBP7□□□□□ -1.29
CSDE1-218ENST00000610726 PSMD11O00231 422 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 EIF3FO00303 357 aaPredicted RBP7□□□□□ -1.29
CSDE1-218ENST00000610726 LAMP1P11279 417 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 ARNTP27540 789 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 PBX2P40425 430 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 KCNC1P48547 511 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 ADARP55265 1226 aaKnown RBP7□□□□□ -1.29
CSDE1-218ENST00000610726 CLDN8P56748 225 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 CDK3Q00526 305 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 CRB2Q5IJ48 1285 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 PDZK1Q5T2W1 519 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 COMMD6Q7Z4G1 85 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 OR4N5Q8IXE1 308 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 RNF175Q8N4F7 328 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 ZNF671Q8TAW3 534 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 MMABQ96EY8 250 aaPredicted RBP7□□□□□ -1.29
CSDE1-218ENST00000610726 TGM7Q96PF1 710 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 ZNF347Q96SE7 839 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 NDC1Q9BTX1 674 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 APOOQ9BUR5 198 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 EXO5Q9H790 373 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 SMURF2Q9HAU4 748 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 PHF11Q9UIL8 331 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 INTS6Q9UL03 887 aaKnown RBP7□□□□□ -1.29
CSDE1-218ENST00000610726 TRIP12Q14669 1992 aaPredicted RBP7□□□□□ -1.29
CSDE1-218ENST00000610726 C2orf74A8MZ97 194 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 NPC1O15118 1278 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 NPPAP01160 153 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 IL1RNP18510 177 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 AOAHP28039 575 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 IL12BP29460 328 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 FMO3P31513 532 aa7□□□□□ -1.29
CSDE1-218ENST00000610726 DNAJA1P31689 397 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms