RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 UTP15Q8TED0 518 aaKnown RBP13.18□□□□□ -0.3
RNF40-212ENST00000602784 ZNF473Q8WTR7 871 aaKnown RBP13.18□□□□□ -0.3
RNF40-212ENST00000602784 TLCD1Q96CP7 247 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 SMIM10Q96HG1 83 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 GSTO2Q9H4Y5 243 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 ANKHQ9HCJ1 492 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 SLC17A7Q9P2U7 560 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 IL17BQ9UHF5 180 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 GPN3Q9UHW5 284 aaPredicted RBP13.18□□□□□ -0.3
RNF40-212ENST00000602784 PPT2Q9UMR5 302 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 PADI2Q9Y2J8 665 aa13.18□□□□□ -0.3
RNF40-212ENST00000602784 MRPS2Q9Y399 296 aaKnown RBP13.18□□□□□ -0.3
RNF40-212ENST00000602784 IGLV3-12A0A075B6K2 115 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 A0A0A6YYC8 382 aaPredicted RBP13.17□□□□□ -0.3
RNF40-212ENST00000602784 I3L1I5 382 aaPredicted RBP13.17□□□□□ -0.3
RNF40-212ENST00000602784 K7ENP7 123 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 FOXE1O00358 373 aaPredicted RBP13.17□□□□□ -0.3
RNF40-212ENST00000602784 PPP6CO00743 305 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 GALR3O60755 368 aaPredicted RBP13.17□□□□□ -0.3
RNF40-212ENST00000602784 KLF7O75840 302 aaPredicted RBP13.17□□□□□ -0.3
RNF40-212ENST00000602784 ZWINTO95229 277 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 TBX6O95947 436 aaPredicted RBP13.17□□□□□ -0.3
RNF40-212ENST00000602784 FBLP22087 321 aaKnown RBP13.17□□□□□ -0.3
RNF40-212ENST00000602784 OR1D4P47884 311 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 VAC14Q08AM6 782 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 ZRSR2Q15696 482 aaKnown RBP13.17□□□□□ -0.3
RNF40-212ENST00000602784 RBBP7Q16576 425 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 CPSF6Q16630 551 aaKnown RBP eCLIP13.17□□□□□ -0.3
RNF40-212ENST00000602784 TMEM35AQ53FP2 167 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 CFAP157Q5JU67 520 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 AGBL2Q5U5Z8 902 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 MLIPQ5VWP3 458 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 INO80CQ6PI98 192 aaPredicted RBP13.17□□□□□ -0.3
RNF40-212ENST00000602784 FRMD7Q6ZUT3 714 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 RPS27LQ71UM5 84 aaKnown RBP13.17□□□□□ -0.3
RNF40-212ENST00000602784 COX15Q7KZN9 410 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 SYVN1Q86TM6 617 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 C10orf107Q8IVU9 208 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 CCNYL1Q8N7R7 359 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 ENDOVQ8N8Q3 282 aaKnown RBP13.17□□□□□ -0.3
RNF40-212ENST00000602784 AMER3Q8N944 861 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 SRFBP1Q8NEF9 429 aaKnown RBP13.17□□□□□ -0.3
RNF40-212ENST00000602784 OR2L5Q8NG80 312 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 OR4F6Q8NGB9 312 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 OR9A4Q8NGU2 314 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 HUS1BQ8NHY5 278 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 WDR20Q8TBZ3 569 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 TRPC4APQ8TEL6 797 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 SREK1Q8WXA9 508 aaKnown RBP13.17□□□□□ -0.3
RNF40-212ENST00000602784 GAL3ST3Q96A11 431 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 COL26A1Q96A83 441 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 MS4A6EQ96DS6 147 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 MMABQ96EY8 250 aaPredicted RBP13.17□□□□□ -0.3
RNF40-212ENST00000602784 CMTM7Q96FZ5 175 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 TRMOQ9BU70 441 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 MS4A8Q9BY19 250 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 TGIF2Q9GZN2 237 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 ACTL8Q9H568 366 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 WDR70Q9NW82 654 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 ZNF282Q9UDV7 671 aaPredicted RBP13.17□□□□□ -0.3
RNF40-212ENST00000602784 TRPS1Q9UHF7 1281 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 NXT1Q9UKK6 140 aaKnown RBP13.17□□□□□ -0.3
RNF40-212ENST00000602784 TCFL5Q9UL49 500 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 MAP4K5Q9Y4K4 846 aa13.17□□□□□ -0.3
RNF40-212ENST00000602784 VSTM2BA6NLU5 285 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 ZNF891A8MT65 544 aaPredicted RBP13.16□□□□□ -0.3
RNF40-212ENST00000602784 BIRC5O15392 142 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 CREG1O75629 220 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 KLHL18O94889 574 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 ESRRBO95718 433 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 ENO1P06733 434 aaKnown RBP13.16□□□□□ -0.3
RNF40-212ENST00000602784 ZNF888P0CJ79 500 aaPredicted RBP13.16□□□□□ -0.3
RNF40-212ENST00000602784 PCNAP12004 261 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 WT1P19544 449 aaPredicted RBP13.16□□□□□ -0.3
RNF40-212ENST00000602784 IL10P22301 178 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 PTX3P26022 381 aaPredicted RBP13.16□□□□□ -0.3
RNF40-212ENST00000602784 ALDH3A1P30838 453 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 HNRNPH1P31943 449 aaKnown RBP13.16□□□□□ -0.3
RNF40-212ENST00000602784 ARL1P40616 181 aaPredicted RBP13.16□□□□□ -0.3
RNF40-212ENST00000602784 ARFIP1P53367 373 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 SNRPNP63162 240 aaKnown RBP13.16□□□□□ -0.3
RNF40-212ENST00000602784 PHEXP78562 749 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 TGM3Q08188 693 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 SRSF6Q13247 344 aaKnown RBP13.16□□□□□ -0.3
RNF40-212ENST00000602784 TOR1AIP1Q5JTV8 583 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 ARHGAP40Q5TG30 622 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 FRG2Q64ET8 278 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 ADNP2Q6IQ32 1131 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 LETMD1Q6P1Q0 360 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 GPRIN3Q6ZVF9 776 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 CHSY3Q70JA7 882 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 PDSS2Q86YH6 399 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 HOMEZQ8IX15 550 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 DTWD1Q8N5C7 304 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 OR2Y1Q8NGV0 311 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 ZCCHC10Q8TBK6 192 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.16□□□□□ -0.3
RNF40-212ENST00000602784 STARD8Q92502 1023 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 CCT6BQ92526 530 aa13.16□□□□□ -0.3
RNF40-212ENST00000602784 NACC2Q96BF6 587 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms