RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ZNF630Q2M218 657 aaPredicted RBP12.36□□□□□ -0.43
RPS28-204ENST00000602140 BBS9Q3SYG4 887 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 KRTCAP3Q53RY4 240 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 CATSPEREQ5SY80 951 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 XKRXQ6PP77 449 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 GALNTL5Q7Z4T8 443 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 IGDCC3Q8IVU1 814 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 KIF2BQ8N4N8 673 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 TBC1D19Q8N5T2 526 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 HORMAD2Q8N7B1 307 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 GPATCH11Q8N954 259 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 TMEM178AQ8NBL3 297 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 ACTRT1Q8TDG2 376 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 THAP3Q8WTV1 239 aaPredicted RBP12.36□□□□□ -0.43
RPS28-204ENST00000602140 FBXL8Q96CD0 374 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 CERS2Q96G23 380 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 MAGED4Q96JG8 741 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 OSBPL9Q96SU4 736 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 NAT9Q9BTE0 207 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 SPNS1Q9H2V7 528 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 CHST11Q9NPF2 352 aa12.36□□□□□ -0.43
RPS28-204ENST00000602140 PPANQ9NQ55 473 aaKnown RBP12.36□□□□□ -0.43
RPS28-204ENST00000602140 ASPDHA6ND91 283 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 NPIPA5E9PKD4 350 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 NEURL1O76050 574 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 SP1P08047 785 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 SNRPB2P08579 225 aaKnown RBP12.35□□□□□ -0.43
RPS28-204ENST00000602140 JAK1P23458 1154 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 ELAVL4P26378 380 aaKnown RBP12.35□□□□□ -0.43
RPS28-204ENST00000602140 SCTRP47872 440 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 CSHL1Q14406 222 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 HP1BP3Q5SSJ5 553 aaPredicted RBP12.35□□□□□ -0.43
RPS28-204ENST00000602140 TEDDM1Q5T9Z0 273 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 HECTD2Q5U5R9 776 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 ZNF468Q5VIY5 522 aaPredicted RBP12.35□□□□□ -0.43
RPS28-204ENST00000602140 SLC25A25Q6KCM7 469 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 NIPAL1Q6NVV3 410 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 ABHD13Q7L211 337 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.35□□□□□ -0.43
RPS28-204ENST00000602140 STRA8Q7Z7C7 330 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 GALNT7Q86SF2 657 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 RPS19BP1Q86WX3 136 aaKnown RBP12.35□□□□□ -0.43
RPS28-204ENST00000602140 SPPL2CQ8IUH8 684 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 CYP4X1Q8N118 509 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 LGI4Q8N135 537 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 SLC35F6Q8N357 371 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 FAM98AQ8NCA5 519 aaKnown RBP12.35□□□□□ -0.43
RPS28-204ENST00000602140 NT5CQ8TCD5 201 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 ELP5Q8TE02 316 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 SLC5A11Q8WWX8 675 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 ATL1Q8WXF7 558 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 NEIL2Q969S2 332 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 TSNARE1Q96NA8 513 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 FRMD6Q96NE9 622 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 PTCHD1Q96NR3 888 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 OLFM1Q99784 485 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 DDX47Q9H0S4 455 aaKnown RBP12.35□□□□□ -0.43
RPS28-204ENST00000602140 LRFN1Q9P244 771 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 ZFP69BQ9UJL9 534 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 NPIPA1Q9UND3 350 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 ZNF835Q9Y2P0 537 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 VWA7Q9Y334 891 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 OTOGQ6ZRI0 2925 aa12.35□□□□□ -0.43
RPS28-204ENST00000602140 CTAGE15A4D2H0 777 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 ASNA1O43681 348 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 PRMT3O60678 531 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 ENO2P09104 434 aaPredicted RBP12.34□□□□□ -0.43
RPS28-204ENST00000602140 AHRP35869 848 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 HNF4AP41235 474 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 RAB8AP61006 207 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 BTG2P78543 158 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 MAPKAPK3Q16644 382 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 FAM45BPQ6NSW5 357 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 TRMT10BQ6PF06 316 aaKnown RBP12.34□□□□□ -0.43
RPS28-204ENST00000602140 Q6ZPB1 254 aaPredicted RBP12.34□□□□□ -0.43
RPS28-204ENST00000602140 GDF7Q7Z4P5 450 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 CTAGE6Q86UF2 777 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 ANKRD53Q8N9V6 530 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 FAM45AQ8TCE6 357 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 ADAMTS18Q8TE60 1221 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 UTP15Q8TED0 518 aaKnown RBP12.34□□□□□ -0.43
RPS28-204ENST00000602140 CFAP36Q96G28 342 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 PWWP2AQ96N64 755 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 PLAC1Q9HBJ0 212 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 IKZF3Q9UKT9 509 aa12.34□□□□□ -0.43
RPS28-204ENST00000602140 CORO1CQ9ULV4 474 aaPredicted RBP12.34□□□□□ -0.43
RPS28-204ENST00000602140 CSMD2Q7Z408 3487 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 ZNHIT1O43257 154 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 SLC25A12O75746 678 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 COX6B1P14854 86 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 MAOAP21397 527 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 TPP2P29144 1249 aaPredicted RBP12.33□□□□□ -0.44
RPS28-204ENST00000602140 PTGER4P35408 488 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 ELK3P41970 407 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 SMSP52788 366 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 REEP5Q00765 189 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 RBBP5Q15291 538 aaKnown RBP12.33□□□□□ -0.44
RPS28-204ENST00000602140 SBSNQ6UWP8 590 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 QSOX2Q6ZRP7 698 aa12.33□□□□□ -0.44
RPS28-204ENST00000602140 TMPRSS11BQ86T26 416 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms