RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 MAN2B2Q9Y2E5 1009 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 PCDHA9Q9Y5H5 950 aa16.86■□□□□ 0.29
SHKBP1-224ENST00000600718 COL6A3P12111 3177 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 ARHGEF17Q96PE2 2063 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 THADAQ6YHU6 1953 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 ARHGAP10A1A4S6 786 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 UBXN7O94888 489 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 LMNAP02545 664 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 GBAP04062 536 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 TPP2P29144 1249 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 GSTM5P46439 218 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 ARRB1P49407 418 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 BNC1Q01954 994 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 ADPRMQ3LIE5 342 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 C14orf28Q4W4Y0 310 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 FCRL6Q6DN72 434 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 NANOGP8Q6NSW7 305 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 IKBIPQ70UQ0 350 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 R3HCC1LQ7Z5L2 792 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 TMEM132CQ8N3T6 1108 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 SRFBP1Q8NEF9 429 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 DNAJB14Q8TBM8 379 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 COQ8BQ96D53 544 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 SLC38A3Q99624 504 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 CGREF1Q99674 301 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 ZNF717Q9BY31 904 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 REEP4Q9H6H4 257 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 NANOGQ9H9S0 305 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 BCAP29Q9UHQ4 241 aa16.85■□□□□ 0.29
SHKBP1-224ENST00000600718 GABRR3A8MPY1 467 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 ERN1O75460 977 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 HOXB3P14651 431 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 TYRP1P17643 537 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 HNRNPFP52597 415 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 C2orf80Q0P641 193 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 C6orf10Q5SRN2 563 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 CPTPQ5TA50 214 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 OR4C11Q6IEV9 310 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 OR4F3Q6IEY1 312 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 FAM71E1Q6IPT2 247 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 UBE3DQ7Z6J8 389 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 NUDT13Q86X67 352 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 RNF148Q8N7C7 305 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 BAHD1Q8TBE0 780 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 TMEM125Q96AQ2 219 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 MTERF3Q96E29 417 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 SORBS1Q9BX66 1292 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 DDX31Q9H8H2 851 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 FAM120CQ9NX05 1096 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 CMTM6Q9NX76 183 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 SUCOQ9UBS9 1254 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 A0A096LPI6 279 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 PRORSD1PA6NEY8 169 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 RTCAO00442 366 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 NME4O00746 187 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 MAPK12P53778 367 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 TAS2R50P59544 299 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 STXBP1P61764 594 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 CYP4F3Q08477 520 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 HYAL2Q12891 473 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 BNIP3Q12983 259 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 CEP68Q76N32 757 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 KIAA2013Q8IYS2 634 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 SLC25A45Q8N413 288 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 NT5CQ8TCD5 201 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 RSC1A1Q92681 617 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 MS4A6EQ96DS6 147 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 ZNF570Q96NI8 536 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 DUSP26Q9BV47 211 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 LHX9Q9NQ69 397 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 PILRAQ9UKJ1 303 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 POMT2Q9UKY4 750 aa16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 EXO1Q9UQ84 846 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-224ENST00000600718 TECTAO75443 2155 aa16.83■□□□□ 0.29
SHKBP1-224ENST00000600718 CACNA1IQ9P0X4 2223 aa16.83■□□□□ 0.29
SHKBP1-224ENST00000600718 TDRD6O60522 2096 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 PROS1P07225 676 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 LSSP48449 732 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 TRPC1P48995 793 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 WNT3P56703 355 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 TRA2BP62995 288 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 PLIN5Q00G26 463 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 RGS1Q08116 209 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 TRAP1Q12931 704 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 TRIM25Q14258 630 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 TOR1AIP1Q5JTV8 583 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 C6orf132Q5T0Z8 1188 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 LRIF1Q5T3J3 769 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 ANXA8L1Q5VT79 327 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 ASPGQ86U10 573 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 VPS37AQ8NEZ2 397 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 OR2L5Q8NG80 312 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 JADE3Q92613 823 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 PIGKQ92643 395 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 STMN2Q93045 179 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 TM4SF19Q96DZ7 209 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 PPM1MQ96MI6 270 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 OR2A5Q96R48 311 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 SLC6A16Q9GZN6 736 aa16.83■□□□□ 0.28
SHKBP1-224ENST00000600718 AICDAQ9GZX7 198 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms