RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 TRMT1Q9NXH9 659 aaKnown RBP11.36□□□□□ -0.59
SOX2-OT-228ENST00000597828 ARL15Q9NXU5 204 aa11.36□□□□□ -0.59
SOX2-OT-228ENST00000597828 TAS2R13Q9NYV9 303 aa11.36□□□□□ -0.59
SOX2-OT-228ENST00000597828 NPIPA1Q9UND3 350 aa11.36□□□□□ -0.59
SOX2-OT-228ENST00000597828 SLC22A7Q9Y694 548 aa11.36□□□□□ -0.59
SOX2-OT-228ENST00000597828 ADGRG4Q8IZF6 3080 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 TRBC2A0A5B9 178 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 ASPDHA6ND91 283 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 MAGEB17A8MXT2 336 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 DNALI1O14645 258 aaPredicted RBP11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 SLC16A5O15375 505 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 CHST10O43529 356 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 ALOX12P18054 663 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 MAOAP21397 527 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 CCND1P24385 295 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 ELAVL4P26378 380 aaKnown RBP11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 TPP2P29144 1249 aaPredicted RBP11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 HNF4AP41235 474 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 CCR8P51685 355 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 RAB8AP61006 207 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 PDAP1Q13442 181 aaKnown RBP11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 RNFT1Q5M7Z0 435 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 SPANXN3Q5MJ09 141 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 TRMT10BQ6PF06 316 aaKnown RBP11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 RPTNQ6XPR3 784 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 C3P1Q6ZMU1 363 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 GDF7Q7Z4P5 450 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 SIAH3Q8IW03 269 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 CNTN4Q8IWV2 1026 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 CHERPQ8IWX8 916 aaKnown RBP11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 CYP4X1Q8N118 509 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 SLC35F6Q8N357 371 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 CPSF7Q8N684 471 aaKnown RBP11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 GPATCH11Q8N954 259 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 ANKRD53Q8N9V6 530 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 ABHD11Q8NFV4 315 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 OR4K1Q8NGD4 311 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 OR56A3Q8NH54 315 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 ELP5Q8TE02 316 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 NEIL2Q969S2 332 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 TBC1D20Q96BZ9 403 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 CERS2Q96G23 380 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 CFAP36Q96G28 342 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 SNF8Q96H20 258 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 PBKQ96KB5 322 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 OR1F2PQ96R84 312 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 OSBPL9Q96SU4 736 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 HAUS8Q9BT25 410 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 TRIM8Q9BZR9 551 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 DDX47Q9H0S4 455 aaKnown RBP11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 LRFN1Q9P244 771 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 ASIC3Q9UHC3 531 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 CHMP2BQ9UQN3 213 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 ZNF835Q9Y2P0 537 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 PCDHGB6Q9Y5F9 930 aa11.35□□□□□ -0.59
SOX2-OT-228ENST00000597828 A8MUA0 341 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 NDC80O14777 642 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 SP1P08047 785 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 HIST1H2AGP0C0S8 130 aaPredicted RBP11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 ESRRAP11474 423 aaPredicted RBP11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 CD46P15529 392 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 HIST1H2ADP20671 130 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 SCTRP47872 440 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 REEP5Q00765 189 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 HYAL2Q12891 473 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 ZNF460Q14592 562 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 HERC3Q15034 1050 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 PPP1R7Q15435 360 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 MAPKAPK3Q16644 382 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 BBS9Q3SYG4 887 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 HECTD2Q5U5R9 776 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 DUPD1Q68J44 220 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 SBSNQ6UWP8 590 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 Q6ZPB1 254 aaPredicted RBP11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 FGD2Q7Z6J4 655 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 TMPRSS11BQ86T26 416 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 SPPL2CQ8IUH8 684 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 SLC5A8Q8N695 610 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 TMEM178AQ8NBL3 297 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 NT5CQ8TCD5 201 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 ADAMTS18Q8TE60 1221 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 UTP15Q8TED0 518 aaKnown RBP11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 GRK7Q8WTQ7 553 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 THAP3Q8WTV1 239 aaPredicted RBP11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 SLC5A11Q8WWX8 675 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 HIST1H2AHQ96KK5 128 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 PHF12Q96QT6 1004 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 HIST1H2AJQ99878 128 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 TRIM51Q9BSJ1 452 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 H2AFJQ9BTM1 129 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 SARGQ9BW04 601 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 RHBGQ9H310 441 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 KLHL31Q9H511 634 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 NECTIN3Q9NQS3 549 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 PYCARDQ9ULZ3 195 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 JRKLQ9Y4A0 524 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 POLQO75417 2590 aa11.34□□□□□ -0.59
SOX2-OT-228ENST00000597828 A0A0G2JN53 185 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 NPEPPSL1A6NEC2 478 aa11.33□□□□□ -0.6
SOX2-OT-228ENST00000597828 SAGE2PA6NJ88 616 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms