RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 GPRC5BQ9NZH0 403 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 PTGFRNQ9P2B2 879 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 PCDHGA10Q9Y5H3 936 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 CSAG2Q9Y5P2 127 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 COPG1Q9Y678 874 aaKnown RBP14.41□□□□□ -0.1
TRIM28-203ENST00000593582 DYTNA2CJ06 578 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 OR2W5A6NFC9 320 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 TCP11X1B4DZS4 312 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 CLGNO14967 610 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 TAPBPO15533 448 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 STK16O75716 305 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 CDC123O75794 336 aaPredicted RBP14.4□□□□□ -0.1
TRIM28-203ENST00000593582 SEC24DO94855 1032 aaPredicted RBP14.4□□□□□ -0.1
TRIM28-203ENST00000593582 TUBB4AP04350 444 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 FHP07954 510 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 SLC35E2BP0CK96 405 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 JAK1P23458 1154 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 GSTM2P28161 218 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 UQCRFS1P47985 274 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 HSPA7P48741 367 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 ARG2P78540 354 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 SLBPQ14493 270 aaKnown RBP eCLIP14.4□□□□□ -0.1
TRIM28-203ENST00000593582 ZNF169Q14929 603 aaPredicted RBP14.4□□□□□ -0.1
TRIM28-203ENST00000593582 ABRAXAS2Q15018 415 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 NSDHLQ15738 373 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 B3GNTL1Q67FW5 361 aaPredicted RBP14.4□□□□□ -0.1
TRIM28-203ENST00000593582 LANCL3Q6ZV70 420 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 CCDC91Q7Z6B0 441 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 ANKRD37Q7Z713 158 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 CMC1Q7Z7K0 106 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 MMGT1Q8N4V1 131 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 SIRT6Q8N6T7 355 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 SNX31Q8N9S9 440 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 PDPRQ8NCN5 879 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 STAG3L4Q8TBR4 150 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 PSMF1Q92530 271 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 EXT2Q93063 718 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 IMMP1LQ96LU5 166 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 TMEM79Q9BSE2 394 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 RBCK1Q9BYM8 510 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 PITHD1Q9GZP4 211 aaPredicted RBP14.4□□□□□ -0.1
TRIM28-203ENST00000593582 TSPYL1Q9H0U9 437 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 ALG9Q9H6U8 611 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 CLK4Q9HAZ1 481 aaKnown RBP14.4□□□□□ -0.1
TRIM28-203ENST00000593582 NMRAL1Q9HBL8 299 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 ASF1BQ9NVP2 202 aa14.4□□□□□ -0.1
TRIM28-203ENST00000593582 IGHV3-20A0A0C4DH32 117 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 CTAGE15A4D2H0 777 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 CLEC18AA5D8T8 446 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 MAGEB17A8MXT2 336 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 KIF2AO00139 706 aaPredicted RBP14.39□□□□□ -0.11
TRIM28-203ENST00000593582 CHST10O43529 356 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 B3GALT4O96024 378 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 CELA2AP08217 269 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 LTA4HP09960 611 aaKnown RBP14.39□□□□□ -0.11
TRIM28-203ENST00000593582 CTAGE8P0CG41 777 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 ITGAMP11215 1152 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 TFEBP19484 476 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 SOX11P35716 441 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 RAB8AP61006 207 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 STXBP1P61764 594 aaKnown RBP14.39□□□□□ -0.11
TRIM28-203ENST00000593582 OLR1P78380 273 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 RHAGQ02094 409 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 ACTN3Q08043 901 aaPredicted RBP14.39□□□□□ -0.11
TRIM28-203ENST00000593582 HYAL2Q12891 473 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 UAP1Q16222 522 aaPredicted RBP14.39□□□□□ -0.11
TRIM28-203ENST00000593582 PDK4Q16654 411 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 BTBD16Q32M84 506 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 FBXO48Q5FWF7 155 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 MROH9Q5TGP6 573 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 PLAG1Q6DJT9 500 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 CLEC18BQ6UXF7 455 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 CTAGE6Q86UF2 777 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 CTAGE4Q8IX94 777 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.39□□□□□ -0.112e-7■■■■■ 91.6
TRIM28-203ENST00000593582 CLEC18CQ8NCF0 446 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 PLPP5Q8NEB5 264 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 CREB3L4Q8TEY5 395 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 CCT6BQ92526 530 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 MRRFQ96E11 262 aaKnown RBP14.39□□□□□ -0.11
TRIM28-203ENST00000593582 SEC16BQ96JE7 1060 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 EHD1Q9H4M9 534 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 KLHL31Q9H511 634 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 AGPAT4Q9NRZ5 378 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 LANCL2Q9NS86 450 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 TEKT2Q9UIF3 430 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 PTBP2Q9UKA9 531 aaKnown RBP14.39□□□□□ -0.11
TRIM28-203ENST00000593582 ACOT9Q9Y305 439 aa14.39□□□□□ -0.11
TRIM28-203ENST00000593582 RP1L1Q8IWN7 2480 aaPredicted RBP14.39□□□□□ -0.11
TRIM28-203ENST00000593582 ANKDD1BA6NHY2 528 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 PSMD12O00232 456 aaPredicted RBP14.38□□□□□ -0.11
TRIM28-203ENST00000593582 CCNT2O60583 730 aaKnown RBP14.38□□□□□ -0.11
TRIM28-203ENST00000593582 B4GALT2O60909 372 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 SMIM10L1P0DMW3 83 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 HPDP32754 393 aaPredicted RBP14.38□□□□□ -0.11
TRIM28-203ENST00000593582 TSFMP43897 325 aaKnown RBP14.38□□□□□ -0.11
TRIM28-203ENST00000593582 EXT1Q16394 746 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 FAM83EQ2M2I3 478 aa14.38□□□□□ -0.11
TRIM28-203ENST00000593582 GLE1Q53GS7 698 aaKnown RBP14.38□□□□□ -0.11
TRIM28-203ENST00000593582 XKR6Q5GH73 641 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms