RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 SYBUQ9NX95 663 aa18.36■□□□□ 0.53
PRKCSH-216ENST00000592445 VPS9D1Q9Y2B5 631 aa18.36■□□□□ 0.53
PRKCSH-216ENST00000592445 REXO2Q9Y3B8 237 aaKnown RBP18.36■□□□□ 0.53
PRKCSH-216ENST00000592445 GFYI3L273 518 aa18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 KLK8O60259 260 aa18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 LCMT2O60294 686 aaKnown RBP18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 MPC1LP0DKB6 136 aa18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 OGNP20774 298 aaKnown RBP18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 RPL22P35268 128 aaKnown RBP18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 GPR85P60893 370 aa18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 SKP1P63208 163 aa18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 BASP1P80723 227 aaKnown RBP18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 CEBPEQ15744 281 aa18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 PAOXQ6QHF9 649 aa18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 UBE2R2Q712K3 238 aaPredicted RBP18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 KIAA1328Q86T90 577 aa18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 C17orf64Q86WR6 236 aa18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 CYP4Z2PQ8N1L4 340 aa18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 TMEM156Q8N614 296 aa18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 OR52N2Q8NGI0 321 aa18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 OR10Q1Q8NGQ4 319 aa18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 ALKBH8Q96BT7 664 aaKnown RBP18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 DEFB127Q9H1M4 99 aa18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 GSX1Q9H4S2 264 aaPredicted RBP18.35■□□□□ 0.53
PRKCSH-216ENST00000592445 ACANP16112 2415 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 A0A1B0GTL3 188 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 FAM237BA0A1B0GVD1 139 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 SAGE2PA6NJ88 616 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 CHST10O43529 356 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 ENO3P13929 434 aaPredicted RBP18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 OLR1P78380 273 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 FOXD4Q12950 439 aaPredicted RBP18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 SEL1L2Q5TEA6 688 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 CENPUQ71F23 418 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 CILP2Q8IUL8 1156 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 SPNS2Q8IVW8 549 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 ZFP62Q8NB50 900 aaPredicted RBP18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 MFSD9Q8NBP5 474 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 ACRBPQ8NEB7 543 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 MYRIPQ8NFW9 859 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 GIMAP7Q8NHV1 300 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 POLDIP3Q9BY77 421 aaKnown RBP18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 SLC6A16Q9GZN6 736 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 CCDC68Q9H2F9 335 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 PLSCR2Q9NRY7 297 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 ST6GALNAC2Q9UJ37 374 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 SH2B3Q9UQQ2 575 aa18.34■□□□□ 0.53
PRKCSH-216ENST00000592445 CTAGE9A4FU28 777 aa18.33■□□□□ 0.52
PRKCSH-216ENST00000592445 TMEM200CA6NKL6 621 aa18.33■□□□□ 0.52
PRKCSH-216ENST00000592445 A8MUA0 341 aa18.33■□□□□ 0.52
PRKCSH-216ENST00000592445 NDUFS4O43181 175 aa18.33■□□□□ 0.52
PRKCSH-216ENST00000592445 GALR3O60755 368 aaPredicted RBP18.33■□□□□ 0.52
PRKCSH-216ENST00000592445 MEF2AQ02078 507 aaPredicted RBP18.33■□□□□ 0.52
PRKCSH-216ENST00000592445 DEFB134Q4QY38 66 aa18.33■□□□□ 0.52
PRKCSH-216ENST00000592445 EMC4Q5J8M3 183 aa18.33■□□□□ 0.52
PRKCSH-216ENST00000592445 NEPROQ6NW34 567 aa18.33■□□□□ 0.52
PRKCSH-216ENST00000592445 ZNF740Q8NDX6 193 aa18.33■□□□□ 0.52
PRKCSH-216ENST00000592445 HES6Q96HZ4 224 aa18.33■□□□□ 0.52
PRKCSH-216ENST00000592445 TRIM5Q9C035 493 aa18.33■□□□□ 0.52
PRKCSH-216ENST00000592445 INTS10Q9NVR2 710 aaKnown RBP18.33■□□□□ 0.52
PRKCSH-216ENST00000592445 KLHL42Q9P2K6 505 aa18.33■□□□□ 0.52
PRKCSH-216ENST00000592445 SOX13Q9UN79 622 aa18.33■□□□□ 0.52
PRKCSH-216ENST00000592445 ABCA4P78363 2273 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 NPIPA2E9PIF3 369 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 NPIPA3F8WFD2 350 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 DNAJB6O75190 326 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 CTAG2O75638 210 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 SERPIND1P05546 499 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 CDH1P12830 882 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 PAMP19021 973 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 BTG2P78543 158 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 GXYLT1Q4G148 440 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 ZNF470Q6ECI4 717 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 KIAA0930Q6ICG6 404 aaPredicted RBP18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 CYHR1Q6ZMK1 362 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 MDGA2Q7Z553 956 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 ZZZ3Q8IYH5 903 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 AFAP1L2Q8N4X5 818 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 ATG10Q9H0Y0 220 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 LIME1Q9H400 295 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 TIMMDC1Q9NPL8 285 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 FBXW2Q9UKT8 454 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 EDARQ9UNE0 448 aa18.32■□□□□ 0.52
PRKCSH-216ENST00000592445 TRBV11-1A0A0K0K1C0 115 aa18.31■□□□□ 0.52
PRKCSH-216ENST00000592445 B3GALT4O96024 378 aa18.31■□□□□ 0.52
PRKCSH-216ENST00000592445 F7P08709 466 aaPredicted RBP18.31■□□□□ 0.52
PRKCSH-216ENST00000592445 ALOX12P18054 663 aa18.31■□□□□ 0.52
PRKCSH-216ENST00000592445 MAOAP21397 527 aa18.31■□□□□ 0.52
PRKCSH-216ENST00000592445 DNASE1P24855 282 aa18.31■□□□□ 0.52
PRKCSH-216ENST00000592445 NR0B1P51843 470 aaKnown RBP18.31■□□□□ 0.52
PRKCSH-216ENST00000592445 PPIAP62937 165 aaKnown RBP18.31■□□□□ 0.52
PRKCSH-216ENST00000592445 PLGLB1Q02325 96 aa18.31■□□□□ 0.52
PRKCSH-216ENST00000592445 NIPAL1Q6NVV3 410 aa18.31■□□□□ 0.52
PRKCSH-216ENST00000592445 RAD9BQ6WBX8 426 aa18.31■□□□□ 0.52
PRKCSH-216ENST00000592445 QSOX2Q6ZRP7 698 aa18.31■□□□□ 0.52
PRKCSH-216ENST00000592445 PIWIL4Q7Z3Z4 852 aaKnown RBP18.31■□□□□ 0.52
PRKCSH-216ENST00000592445 SLC13A5Q86YT5 568 aaPredicted RBP18.31■□□□□ 0.52
PRKCSH-216ENST00000592445 CPNE9Q8IYJ1 553 aa18.31■□□□□ 0.52
PRKCSH-216ENST00000592445 ARMC10Q8N2F6 343 aa18.31■□□□□ 0.52
PRKCSH-216ENST00000592445 ARMC2Q8NEN0 867 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms