RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 PPIL6Q8IXY8 311 aa13.29□□□□□ -0.28
ERCC1-205ENST00000587888 ZNF295-AS1Q8N0V1 137 aa13.29□□□□□ -0.28
ERCC1-205ENST00000587888 RASGEF1CQ8N431 466 aa13.29□□□□□ -0.28
ERCC1-205ENST00000587888 PBKQ96KB5 322 aa13.29□□□□□ -0.28
ERCC1-205ENST00000587888 FRMD6Q96NE9 622 aa13.29□□□□□ -0.28
ERCC1-205ENST00000587888 TRIM54Q9BYV2 358 aa13.29□□□□□ -0.28
ERCC1-205ENST00000587888 RHBGQ9H310 441 aa13.29□□□□□ -0.28
ERCC1-205ENST00000587888 GPAMQ9HCL2 828 aa13.29□□□□□ -0.28
ERCC1-205ENST00000587888 LRBAP50851 2863 aa13.29□□□□□ -0.28
ERCC1-205ENST00000587888 TRBC2A0A5B9 178 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 PRMT3O60678 531 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 BANF1O75531 89 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 SLC25A12O75746 678 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 CLDN14O95500 239 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 GUCA1CO95843 209 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 PGAM1P18669 254 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 AGAP20933 346 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 JAK1P23458 1154 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 KIR3DL1P43629 444 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 PWP1Q13610 501 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 CSHL1Q14406 222 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 CRYMQ14894 314 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 Q6ZPB1 254 aaPredicted RBP13.28□□□□□ -0.28
ERCC1-205ENST00000587888 LRRC8AQ8IWT6 810 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 AFAP1L2Q8N4X5 818 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 TBC1D19Q8N5T2 526 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 CPSF7Q8N684 471 aaKnown RBP13.28□□□□□ -0.28
ERCC1-205ENST00000587888 ABHD11Q8NFV4 315 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 OR4K1Q8NGD4 311 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 GABPB2Q8TAK5 448 aaPredicted RBP13.28□□□□□ -0.28
ERCC1-205ENST00000587888 ELP5Q8TE02 316 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 MTFMTQ96DP5 389 aaKnown RBP13.28□□□□□ -0.28
ERCC1-205ENST00000587888 OR4K3Q96R72 315 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 TRIM8Q9BZR9 551 aa13.28□□□□□ -0.28
ERCC1-205ENST00000587888 PPANQ9NQ55 473 aaKnown RBP13.28□□□□□ -0.28
ERCC1-205ENST00000587888 MAOAP21397 527 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 CYB561P49447 251 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 RAB8AP61006 207 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 SKP1P63208 163 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 RGS1Q08116 209 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 PDAP1Q13442 181 aaKnown RBP13.27□□□□□ -0.29
ERCC1-205ENST00000587888 CYP1B1Q16678 543 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 RNFT1Q5M7Z0 435 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 HP1BP3Q5SSJ5 553 aaPredicted RBP13.27□□□□□ -0.29
ERCC1-205ENST00000587888 ABHD13Q7L211 337 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 DOLPP1Q86YN1 238 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 SIAH3Q8IW03 269 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 GHDCQ8N2G8 530 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 GPATCH11Q8N954 259 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 OR56A3Q8NH54 315 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 NT5CQ8TCD5 201 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 UTP15Q8TED0 518 aaKnown RBP13.27□□□□□ -0.29
ERCC1-205ENST00000587888 AGAP11Q8TF27 550 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 NEIL2Q969S2 332 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 TSNARE1Q96NA8 513 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 TRIM51Q9BSJ1 452 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 SPNS1Q9H2V7 528 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 SLC17A6Q9P2U8 582 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 ZFP69BQ9UJL9 534 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 PPP2R2CQ9Y2T4 447 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 JRKLQ9Y4A0 524 aa13.27□□□□□ -0.29
ERCC1-205ENST00000587888 NME2P1O60361 137 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 TSPAN12O95859 305 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 ZNF24P17028 368 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 NME2P22392 152 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 ITGA8P53708 1063 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 MLF1P58340 268 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 HYAL2Q12891 473 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 RBBP5Q15291 538 aaKnown RBP13.26□□□□□ -0.29
ERCC1-205ENST00000587888 PPP1R7Q15435 360 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 MSS51Q4VC12 460 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 SPANXN3Q5MJ09 141 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 RNASEH2BQ5TBB1 312 aaKnown RBP13.26□□□□□ -0.29
ERCC1-205ENST00000587888 HECTD2Q5U5R9 776 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 IGDCC3Q8IVU1 814 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 LGI4Q8N135 537 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 GRK7Q8WTQ7 553 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 SLC5A11Q8WWX8 675 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 ATL1Q8WXF7 558 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 TMEM125Q96AQ2 219 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 FBXL8Q96CD0 374 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 NAP1L3Q99457 506 aaPredicted RBP13.26□□□□□ -0.29
ERCC1-205ENST00000587888 SARGQ9BW04 601 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 DEFB126Q9BYW3 111 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 KLHL31Q9H511 634 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 NECTIN3Q9NQS3 549 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 VWA7Q9Y334 891 aa13.26□□□□□ -0.29
ERCC1-205ENST00000587888 CTAGE15A4D2H0 777 aa13.25□□□□□ -0.29
ERCC1-205ENST00000587888 PSMD12O00232 456 aaPredicted RBP13.25□□□□□ -0.29
ERCC1-205ENST00000587888 PGRMC1O00264 195 aaKnown RBP13.25□□□□□ -0.29
ERCC1-205ENST00000587888 PRRG2O14669 202 aa13.25□□□□□ -0.29
ERCC1-205ENST00000587888 NRDCO43847 1150 aa13.25□□□□□ -0.29
ERCC1-205ENST00000587888 TTC4O95801 387 aa13.25□□□□□ -0.29
ERCC1-205ENST00000587888 SAT1P21673 171 aa13.25□□□□□ -0.29
ERCC1-205ENST00000587888 PTGER1P34995 402 aa13.25□□□□□ -0.29
ERCC1-205ENST00000587888 RFC3P40938 356 aa13.25□□□□□ -0.29
ERCC1-205ENST00000587888 SCTRP47872 440 aa13.25□□□□□ -0.29
ERCC1-205ENST00000587888 HLCSP50747 726 aa13.25□□□□□ -0.29
ERCC1-205ENST00000587888 AP1S2P56377 157 aa13.25□□□□□ -0.29
ERCC1-205ENST00000587888 CCZ1BP86790 482 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms