RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 MRPL49Q13405 166 aaKnown RBP16.69■□□□□ 0.26
TPM4-206ENST00000587201 SLBPQ14493 270 aaKnown RBP eCLIP16.69■□□□□ 0.26
TPM4-206ENST00000587201 ZNF169Q14929 603 aaPredicted RBP16.69■□□□□ 0.26
TPM4-206ENST00000587201 EFTUD2Q15029 972 aaKnown RBP eCLIP16.69■□□□□ 0.264e-7■■■■□ 26.7
TPM4-206ENST00000587201 TLR1Q15399 786 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 OR4D1Q15615 310 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 FBXO48Q5FWF7 155 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 FHL5Q5TD97 284 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 SULT1C3Q6IMI6 304 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 CLEC18BQ6UXF7 455 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 ANKRD37Q7Z713 158 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 CMC1Q7Z7K0 106 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 CTAGE6Q86UF2 777 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 CLEC18CQ8NCF0 446 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 EXT2Q93063 718 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 KIAA1191Q96A73 305 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 ESAMQ96AP7 390 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 UBXN10Q96LJ8 280 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 IMMP1LQ96LU5 166 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 OR1F2PQ96R84 312 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 SLC6A16Q9GZN6 736 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 ZDHHC18Q9NUE0 388 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 DNAJC11Q9NVH1 559 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 GPRC5BQ9NZH0 403 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 RNF112Q9ULX5 631 aa16.69■□□□□ 0.26
TPM4-206ENST00000587201 SHANK1Q9Y566 2161 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 DYTNA2CJ06 578 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 CLGNO14967 610 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 CHST10O43529 356 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 DNAJB6O75190 326 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 STK16O75716 305 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 FHP07954 510 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 SERPINA6P08185 405 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 CRABP2P29373 138 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 GGT5P36269 586 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 GMPRP36959 345 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 HSPA7P48741 367 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 HYAL2Q12891 473 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 NR6A1Q15406 480 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 NSDHLQ15738 373 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 BTBD16Q32M84 506 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 TOR1AIP1Q5JTV8 583 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 CDKL4Q5MAI5 379 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 B3GNTL1Q67FW5 361 aaPredicted RBP16.68■□□□□ 0.26
TPM4-206ENST00000587201 SLCO4C1Q6ZQN7 724 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 TBC1D1Q86TI0 1168 aaPredicted RBP16.68■□□□□ 0.26
TPM4-206ENST00000587201 KRT78Q8N1N4 520 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 AMER2Q8N7J2 671 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 SNX31Q8N9S9 440 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 PLPP5Q8NEB5 264 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 CATSPER1Q8NEC5 780 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 TTLQ8NG68 377 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 CREB3L4Q8TEY5 395 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 CCT6BQ92526 530 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 TBC1D20Q96BZ9 403 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 MRRFQ96E11 262 aaKnown RBP16.68■□□□□ 0.26
TPM4-206ENST00000587201 KLHL31Q9H511 634 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 LANCL2Q9NS86 450 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 PLA2G3Q9NZ20 509 aa16.68■□□□□ 0.26
TPM4-206ENST00000587201 SLC35E2BP0CK96 405 aa16.67■□□□□ 0.26
TPM4-206ENST00000587201 JAK1P23458 1154 aa16.67■□□□□ 0.26
TPM4-206ENST00000587201 PHBP35232 272 aa16.67■□□□□ 0.26
TPM4-206ENST00000587201 TSFMP43897 325 aaKnown RBP16.67■□□□□ 0.26
TPM4-206ENST00000587201 STXBP1P61764 594 aaKnown RBP16.67■□□□□ 0.26
TPM4-206ENST00000587201 RHAGQ02094 409 aa16.67■□□□□ 0.26
TPM4-206ENST00000587201 ACTN3Q08043 901 aaPredicted RBP16.67■□□□□ 0.26
TPM4-206ENST00000587201 ABRAXAS2Q15018 415 aa16.67■□□□□ 0.26
TPM4-206ENST00000587201 EIF2S3LQ2VIR3 472 aaKnown RBP16.67■□□□□ 0.26
TPM4-206ENST00000587201 TMIGD1Q6UXZ0 262 aa16.67■□□□□ 0.26
TPM4-206ENST00000587201 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.67■□□□□ 0.26
TPM4-206ENST00000587201 MMGT1Q8N4V1 131 aa16.67■□□□□ 0.26
TPM4-206ENST00000587201 PDPRQ8NCN5 879 aa16.67■□□□□ 0.26
TPM4-206ENST00000587201 OR1N1Q8NGS0 311 aa16.67■□□□□ 0.26
TPM4-206ENST00000587201 STAG3L4Q8TBR4 150 aa16.67■□□□□ 0.26
TPM4-206ENST00000587201 TSLPQ969D9 159 aa16.67■□□□□ 0.26
TPM4-206ENST00000587201 MAGEB10Q96LZ2 347 aaPredicted RBP16.67■□□□□ 0.26
TPM4-206ENST00000587201 ALG9Q9H6U8 611 aa16.67■□□□□ 0.26
TPM4-206ENST00000587201 NMRAL1Q9HBL8 299 aa16.67■□□□□ 0.26
TPM4-206ENST00000587201 AGPAT4Q9NRZ5 378 aa16.67■□□□□ 0.26
TPM4-206ENST00000587201 MTRF1LQ9UGC7 380 aaKnown RBP16.67■□□□□ 0.26
TPM4-206ENST00000587201 PTBP2Q9UKA9 531 aaKnown RBP16.67■□□□□ 0.26
TPM4-206ENST00000587201 NTNG1Q9Y2I2 539 aa16.67■□□□□ 0.26
TPM4-206ENST00000587201 SETXQ7Z333 2677 aaKnown RBP16.66■□□□□ 0.26
TPM4-206ENST00000587201 MAGEB17A8MXT2 336 aa16.66■□□□□ 0.26
TPM4-206ENST00000587201 CCNT2O60583 730 aaKnown RBP16.66■□□□□ 0.26
TPM4-206ENST00000587201 B4GALT2O60909 372 aa16.66■□□□□ 0.26
TPM4-206ENST00000587201 AGFG2O95081 481 aa16.66■□□□□ 0.26
TPM4-206ENST00000587201 F10P00742 488 aa16.66■□□□□ 0.26
TPM4-206ENST00000587201 LTA4HP09960 611 aaKnown RBP16.66■□□□□ 0.26
TPM4-206ENST00000587201 SMIM10L1P0DMW3 83 aa16.66■□□□□ 0.26
TPM4-206ENST00000587201 TFEBP19484 476 aa16.66■□□□□ 0.26
TPM4-206ENST00000587201 DLG1Q12959 904 aa16.66■□□□□ 0.26
TPM4-206ENST00000587201 UAP1Q16222 522 aaPredicted RBP16.66■□□□□ 0.26
TPM4-206ENST00000587201 SFT2D3Q587I9 215 aa16.66■□□□□ 0.26
TPM4-206ENST00000587201 PLAG1Q6DJT9 500 aa16.66■□□□□ 0.26
TPM4-206ENST00000587201 PAPD4Q6PIY7 484 aaKnown RBP16.66■□□□□ 0.26
TPM4-206ENST00000587201 CEP128Q6ZU80 1094 aa16.66■□□□□ 0.26
TPM4-206ENST00000587201 MNS1Q8NEH6 495 aa16.66■□□□□ 0.26
TPM4-206ENST00000587201 HAS2Q92819 552 aa16.66■□□□□ 0.26
TPM4-206ENST00000587201 SMIM10Q96HG1 83 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms