RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 KCTD4Q8WVF5 259 aa14.83□□□□□ -0.04
SKA2-209ENST00000583976 HIST1H2AHQ96KK5 128 aa14.83□□□□□ -0.04
SKA2-209ENST00000583976 HIST1H2AJQ99878 128 aa14.83□□□□□ -0.04
SKA2-209ENST00000583976 PLCD4Q9BRC7 762 aa14.83□□□□□ -0.04
SKA2-209ENST00000583976 H2AFJQ9BTM1 129 aa14.83□□□□□ -0.04
SKA2-209ENST00000583976 YIPF2Q9BWQ6 316 aa14.83□□□□□ -0.04
SKA2-209ENST00000583976 TRIM54Q9BYV2 358 aa14.83□□□□□ -0.04
SKA2-209ENST00000583976 DERL2Q9GZP9 239 aa14.83□□□□□ -0.04
SKA2-209ENST00000583976 ACOT9Q9Y305 439 aa14.83□□□□□ -0.04
SKA2-209ENST00000583976 A0A0A6YYC8 382 aaPredicted RBP14.82□□□□□ -0.04
SKA2-209ENST00000583976 PRSS44E7EML9 344 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 I3L1I5 382 aaPredicted RBP14.82□□□□□ -0.04
SKA2-209ENST00000583976 PCDH17O14917 1159 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 ITGAMP11215 1152 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 CD1DP15813 335 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 CNTFP26441 200 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 RPA3P35244 121 aaPredicted RBP14.82□□□□□ -0.04
SKA2-209ENST00000583976 EMP2P54851 167 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 PMP22Q01453 160 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 PCOLCEQ15113 449 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 ZNF425Q6IV72 752 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 SBSNQ6UWP8 590 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 FRA10AC1Q70Z53 315 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 EPS8L3Q8TE67 593 aaKnown RBP14.82□□□□□ -0.04
SKA2-209ENST00000583976 ZNF480Q8WV37 535 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 NR4A3Q92570 626 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 ALKBH8Q96BT7 664 aaKnown RBP14.82□□□□□ -0.04
SKA2-209ENST00000583976 NXNL1Q96CM4 212 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 UBXN10Q96LJ8 280 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 CCDC138Q96M89 665 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 ATG10Q9H0Y0 220 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 MRPS30Q9NP92 439 aaKnown RBP14.82□□□□□ -0.04
SKA2-209ENST00000583976 ARL15Q9NXU5 204 aa14.82□□□□□ -0.04
SKA2-209ENST00000583976 PSMC3IPQ9P2W1 217 aaPredicted RBP14.82□□□□□ -0.04
SKA2-209ENST00000583976 A0A087X1B8 175 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 IQANK1A0A1B0GTG1 560 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 A0A1W2PQ72 361 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 TLDC2A0PJX2 215 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 DYTNA2CJ06 578 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 NCF1BA6NI72 391 aaPredicted RBP14.81□□□□□ -0.04
SKA2-209ENST00000583976 NCF1CA8MVU1 366 aaPredicted RBP14.81□□□□□ -0.04
SKA2-209ENST00000583976 HAT1O14929 419 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 FOXS1O43638 330 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 SERPINA7P05543 415 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 UQCRHP07919 91 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 LTA4HP09960 611 aaKnown RBP14.81□□□□□ -0.04
SKA2-209ENST00000583976 NCF1P14598 390 aaPredicted RBP14.81□□□□□ -0.04
SKA2-209ENST00000583976 MST1P26927 711 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 IMPA1P29218 277 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 ST13P50502 369 aaKnown RBP14.81□□□□□ -0.04
SKA2-209ENST00000583976 ATP6V0D1P61421 351 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 IFFO1Q0D2I5 559 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 ICE2Q659A1 982 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 RPUSD3Q6P087 351 aaKnown RBP14.81□□□□□ -0.04
SKA2-209ENST00000583976 NDUFAF7Q7L592 441 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 SMPDL3AQ92484 453 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 EXT2Q93063 718 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 MMABQ96EY8 250 aaPredicted RBP14.81□□□□□ -0.04
SKA2-209ENST00000583976 VPS50Q96JG6 964 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 OR2A5Q96R48 311 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 LMF1Q96S06 567 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 EGFL8Q99944 293 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 IGSF5Q9NSI5 407 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 C14orf105Q9NVL8 296 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 RIC8BQ9NVN3 520 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 FETUBQ9UGM5 382 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 SH3BGRL2Q9UJC5 107 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 ENTPD4Q9Y227 616 aa14.81□□□□□ -0.04
SKA2-209ENST00000583976 IGHV3-20A0A0C4DH32 117 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 ZNF839A8K0R7 811 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 FOXO6A8MYZ6 492 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 E7ENX8 843 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 HNRNPRO43390 633 aaKnown RBP14.8□□□□□ -0.04
SKA2-209ENST00000583976 WISP2O76076 250 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 WDPCPO95876 746 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 HEXBP07686 556 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 ENO2P09104 434 aaPredicted RBP14.8□□□□□ -0.04
SKA2-209ENST00000583976 TFEBP19484 476 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 HSD17B2P37059 387 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 SLC26A3P40879 764 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 TAP2Q03519 686 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 ARHGAP19Q14CB8 494 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 OR4D1Q15615 310 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 PPP1R3AQ16821 1122 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 THEMIS2Q5TEJ8 643 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 AGTRAPQ6RW13 159 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 LANCL3Q6ZV70 420 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 PRSS41Q7RTY9 318 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 ADCK2Q7Z695 626 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 ADAMTSL2Q86TH1 951 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 CENPLQ8N0S6 344 aaPredicted RBP14.8□□□□□ -0.04
SKA2-209ENST00000583976 PLD6Q8N2A8 252 aaKnown RBP14.8□□□□□ -0.04
SKA2-209ENST00000583976 ITLN2Q8WWU7 325 aaPredicted RBP14.8□□□□□ -0.04
SKA2-209ENST00000583976 ANKRD7Q92527 254 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 MTBPQ96DY7 904 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 ALG9Q9H6U8 611 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 NMRAL1Q9HBL8 299 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 ZNF358Q9NW07 568 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 RNF112Q9ULX5 631 aa14.8□□□□□ -0.04
SKA2-209ENST00000583976 OARD1Q9Y530 152 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms