RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 TRBC2A0A5B9 178 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 NPIPA5E9PKD4 350 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 FAM227AF5H4B4 570 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 NDC80O14777 642 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 CHST10O43529 356 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 OR1F1O43749 312 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 DNAJB6O75190 326 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 CDC123O75794 336 aaPredicted RBP9.95□□□□□ -0.82
RFFL-209ENST00000581265 TTC4O95801 387 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 TSPAN12O95859 305 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 AHSGP02765 367 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 FHP07954 510 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 ALOX12P18054 663 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 PGAM1P18669 254 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 JAK1P23458 1154 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 CDKN2DP55273 166 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 AP1S2P56377 157 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 OR4D2P58180 307 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 SKP1P63208 163 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 MEF2AQ02078 507 aaPredicted RBP9.95□□□□□ -0.82
RFFL-209ENST00000581265 OC90Q02509 493 aaPredicted RBP9.95□□□□□ -0.82
RFFL-209ENST00000581265 DHX9Q08211 1270 aaKnown RBP9.95□□□□□ -0.82
RFFL-209ENST00000581265 DEFB134Q4QY38 66 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 GALNTL5Q7Z4T8 443 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 CHERPQ8IWX8 916 aaKnown RBP9.95□□□□□ -0.82
RFFL-209ENST00000581265 PPIL6Q8IXY8 311 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 ARMC10Q8N2F6 343 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 FAM98AQ8NCA5 519 aaKnown RBP9.95□□□□□ -0.82
RFFL-209ENST00000581265 OR56A3Q8NH54 315 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 GABPB2Q8TAK5 448 aaPredicted RBP9.95□□□□□ -0.82
RFFL-209ENST00000581265 TSLPQ969D9 159 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 ALKBH8Q96BT7 664 aaKnown RBP9.95□□□□□ -0.82
RFFL-209ENST00000581265 MS4A14Q96JA4 679 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 MAGED4Q96JG8 741 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 OR4K3Q96R72 315 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 OLFM1Q99784 485 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 TRIM8Q9BZR9 551 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 CDCP1Q9H5V8 836 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 LRFN1Q9P244 771 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 NPIPA1Q9UND3 350 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 MEMO1Q9Y316 297 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 JRKLQ9Y4A0 524 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 ZFHX3Q15911 3703 aa9.95□□□□□ -0.82
RFFL-209ENST00000581265 ZNF860A6NHJ4 632 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 NDUFS4O43181 175 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 PRMT3O60678 531 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 CLDN14O95500 239 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 CD99P14209 185 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 TRHRP34981 398 aaPredicted RBP9.94□□□□□ -0.82
RFFL-209ENST00000581265 AHRP35869 848 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 CYB561P49447 251 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 ST13P50502 369 aaKnown RBP9.94□□□□□ -0.82
RFFL-209ENST00000581265 IL2P60568 153 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 CSHL1Q14406 222 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 CRYMQ14894 314 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 CDSNQ15517 529 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 MAPKAPK3Q16644 382 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 RNFT1Q5M7Z0 435 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 RBM20Q5T481 1227 aaKnown RBP9.94□□□□□ -0.82
RFFL-209ENST00000581265 RNASEH2BQ5TBB1 312 aaKnown RBP9.94□□□□□ -0.82
RFFL-209ENST00000581265 ZNF468Q5VIY5 522 aaPredicted RBP9.94□□□□□ -0.82
RFFL-209ENST00000581265 KIAA0408Q6ZU52 694 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.94□□□□□ -0.82
RFFL-209ENST00000581265 GALNT7Q86SF2 657 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 ZNF227Q86WZ6 799 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 LRRC8AQ8IWT6 810 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 CNTN4Q8IWV2 1026 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 GHDCQ8N2G8 530 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 TBC1D19Q8N5T2 526 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 NT5CQ8TCD5 201 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 PHF10Q8WUB8 498 aaKnown RBP9.94□□□□□ -0.82
RFFL-209ENST00000581265 CHTF18Q8WVB6 975 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 ATL1Q8WXF7 558 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 PYCR2Q96C36 320 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 MTFMTQ96DP5 389 aaKnown RBP9.94□□□□□ -0.82
RFFL-209ENST00000581265 LINGO1Q96FE5 620 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 PDLIM5Q96HC4 596 aaKnown RBP9.94□□□□□ -0.82
RFFL-209ENST00000581265 PTCHD1Q96NR3 888 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 NAP1L3Q99457 506 aaPredicted RBP9.94□□□□□ -0.82
RFFL-209ENST00000581265 NAT9Q9BTE0 207 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 RBCK1Q9BYM8 510 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 TRIM54Q9BYV2 358 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 TSPAN10Q9H1Z9 355 aaPredicted RBP9.94□□□□□ -0.82
RFFL-209ENST00000581265 GPAMQ9HCL2 828 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 ARL15Q9NXU5 204 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 ZFP69BQ9UJL9 534 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 ADGRG4Q8IZF6 3080 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 CACNA1CQ13936 2221 aa9.94□□□□□ -0.82
RFFL-209ENST00000581265 FBN3Q75N90 2809 aa9.93□□□□□ -0.82
RFFL-209ENST00000581265 IGKV3D-11A0A0A0MRZ8 115 aa9.93□□□□□ -0.82
RFFL-209ENST00000581265 E9PLN8 166 aa9.93□□□□□ -0.82
RFFL-209ENST00000581265 ADAM10O14672 748 aa9.93□□□□□ -0.82
RFFL-209ENST00000581265 NME2P1O60361 137 aa9.93□□□□□ -0.82
RFFL-209ENST00000581265 B4GALT2O60909 372 aa9.93□□□□□ -0.82
RFFL-209ENST00000581265 SLC25A12O75746 678 aa9.93□□□□□ -0.82
RFFL-209ENST00000581265 SMIM10L1P0DMW3 83 aa9.93□□□□□ -0.82
RFFL-209ENST00000581265 NME2P22392 152 aa9.93□□□□□ -0.82
RFFL-209ENST00000581265 KIR3DL1P43629 444 aa9.93□□□□□ -0.82
RFFL-209ENST00000581265 SCTRP47872 440 aa9.93□□□□□ -0.82
RFFL-209ENST00000581265 FNTAP49354 379 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms