RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 UBFD1O14562 309 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 ULK1O75385 1050 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 CHEK2O96017 543 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 CHRNGP07510 517 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 C1QTNF9P0C862 333 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 ZNF888P0CJ79 500 aaPredicted RBP13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 CHN1P15882 459 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 ALOX12P18054 663 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 IL1RNP18510 177 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 PTX3P26022 381 aaPredicted RBP13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 RAP1GDS1P52306 607 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 RAB8AP61006 207 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 ABCE1P61221 599 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 RPS13P62277 151 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 DCDP81605 110 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 GALNT1Q10472 559 aaPredicted RBP13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 FAM53BQ14153 422 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 MAP7Q14244 749 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 HERC3Q15034 1050 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 ARHGAP40Q5TG30 622 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 TMEM214Q6NUQ4 689 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 NIPAL1Q6NVV3 410 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 PRMT9Q6P2P2 845 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 TRIM40Q6P9F5 258 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 TIPARPQ7Z3E1 657 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 VN1R5Q7Z5H4 357 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 HOMEZQ8IX15 550 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 DSELQ8IZU8 1212 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 ZNF248Q8NDW4 579 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 SRFBP1Q8NEF9 429 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 WDR20Q8TBZ3 569 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 KCNE4Q8WWG9 221 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 GAL3ST3Q96A11 431 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 MVB12AQ96EY5 273 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 MMABQ96EY8 250 aaPredicted RBP13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 NAF1Q96HR8 494 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 C10orf90Q96M02 699 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 F2RL3Q96RI0 385 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 KCNA7Q96RP8 456 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 DPH2Q9BQC3 489 aaPredicted RBP13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 MS4A8Q9BY19 250 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 SPRY4Q9C004 299 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 SLC6A16Q9GZN6 736 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 REXO4Q9GZR2 422 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 KLHL31Q9H511 634 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 COPS7BQ9H9Q2 264 aaPredicted RBP13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 ZNF304Q9HCX3 659 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 LHX9Q9NQ69 397 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 DMRT3Q9NQL9 472 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 ENAMQ9NRM1 1142 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 DKK4Q9UBT3 224 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 TSC22D4Q9Y3Q8 395 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 SLC22A7Q9Y694 548 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 MAU2Q9Y6X3 613 aa13.8□□□□□ -0.2
NPLOC4-218ENST00000574964 A0A088AWK7 358 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 LRIT2A6NDA9 550 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 MAGEB17A8MXT2 336 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 MANBAO00462 879 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 AZIN1O14977 448 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 ERI3O43414 337 aaKnown RBP13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 PDYNP01213 254 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 UROSP10746 265 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 ZNF10P21506 573 aaPredicted RBP13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 FBLP22087 321 aaKnown RBP13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 RORAP35398 523 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 OR1D4P47884 311 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 SLC1A6P48664 564 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 PLA2G16P53816 162 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 SLC9A5Q14940 896 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 TMEM35AQ53FP2 167 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 MLIPQ5VWP3 458 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 RNF175Q8N4F7 328 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 OR9A4Q8NGU2 314 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 AGR3Q8TD06 166 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 UTP15Q8TED0 518 aaKnown RBP13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 NKD1Q969G9 470 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 KIAA1143Q96AT1 154 aaPredicted RBP13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 MS4A6EQ96DS6 147 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 GBP5Q96PP8 586 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 SERPINI1Q99574 410 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 C17orf62Q9BQA9 187 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 CHST8Q9H2A9 424 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 OR51B5Q9H339 312 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 MANSC1Q9H8J5 431 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 NMRK1Q9NWW6 199 aa13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 IFT80Q9P2H3 777 aaPredicted RBP13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 MRPS2Q9Y399 296 aaKnown RBP13.79□□□□□ -0.2
NPLOC4-218ENST00000574964 A0A0G2JN53 185 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 FOXE1O00358 373 aaPredicted RBP13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 RRP8O43159 456 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 TLX3O43711 291 aaPredicted RBP13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 LYPLA1O75608 230 aaPredicted RBP13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 KLHL18O94889 574 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 SNUPNO95149 360 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 MED26O95402 600 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 NSA2O95478 260 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 TCN2P20062 427 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 SERPINB3P29508 390 aa13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 HNRNPH1P31943 449 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-218ENST00000574964 DLSTP36957 453 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms