RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 NOP53Q9NZM5 478 aaKnown RBP14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 PDP2Q9P2J9 529 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 TMED5Q9Y3A6 229 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 DNAH14Q0VDD8 3507 aa14.7□□□□□ -0.06
HERPUD1-219ENST00000570273 DCHS1Q96JQ0 3298 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 PLPP1O14494 284 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 ERI3O43414 337 aaKnown RBP14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 TIA1P31483 386 aaKnown RBP eCLIP14.69□□□□□ -0.067e-7■■□□□ 14.1
HERPUD1-219ENST00000570273 GABRA4P48169 554 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 LIMK1P53667 647 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 DIO3P55073 304 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 TGM3Q08188 693 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 HYAL2Q12891 473 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 SQLEQ14534 574 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 HKDC1Q2TB90 917 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 ADPRMQ3LIE5 342 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 DGLUCYQ7Z3D6 616 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 ARHGAP22Q7Z5H3 698 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 RCBTB1Q8NDN9 531 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 GAL3ST3Q96A11 431 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 RGMAQ96B86 450 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 ERP27Q96DN0 273 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 MS4A6EQ96DS6 147 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 METTL2AQ96IZ6 378 aaKnown RBP14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 LRRC37BQ96QE4 947 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 SORBS1Q9BX66 1292 aaKnown RBP14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 AICDAQ9GZX7 198 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 KLHL31Q9H511 634 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 FANCEQ9HB96 536 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 SAR1AQ9NR31 198 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 ASIC5Q9NY37 505 aa14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 RUVBL1Q9Y265 456 aaKnown RBP14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 COPG1Q9Y678 874 aaKnown RBP14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 PTPRZ1P23471 2315 aaPredicted RBP14.69□□□□□ -0.06
HERPUD1-219ENST00000570273 A0A0G2JN53 185 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 URADA6NGE7 173 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 TMEM150CB9EJG8 249 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 RTCAO00442 366 aaKnown RBP14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 TXNDC9O14530 226 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 PCDH7O60245 1069 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 SRPX2O60687 465 aaPredicted RBP14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 ZNF888P0CJ79 500 aaPredicted RBP14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 IDO1P14902 403 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 SSR2P43308 183 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 ATP4BP51164 291 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 PLA2G16P53816 162 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 E2F1Q01094 437 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 TRA2AQ13595 282 aaKnown RBP eCLIP14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 KIAA0040Q15053 153 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 RPS6KA2Q15349 733 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 TRIP6Q15654 476 aaKnown RBP14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 GPR19Q15760 415 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 GSTA3Q16772 222 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 WASHC2DQ5SRD0 308 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 NOXRED1Q6NXP6 359 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 TRIM40Q6P9F5 258 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 RBM44Q6ZP01 1051 aaKnown RBP14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 PAGE2Q7Z2X7 111 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 B3GNT8Q7Z7M8 397 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 NUDT13Q86X67 352 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 PARP9Q8IXQ6 854 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 LIX1Q8N485 282 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 KCT2Q8NC54 265 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 SRFBP1Q8NEF9 429 aaKnown RBP14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 OR2L5Q8NG80 312 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 FCRL1Q96LA6 429 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 C17orf62Q9BQA9 187 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 MYLK2Q9H1R3 596 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 ZNF385DQ9H6B1 395 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 STARD5Q9NSY2 213 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 ARMCX1Q9P291 453 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 DLGAP4Q9Y2H0 992 aa14.68□□□□□ -0.06
HERPUD1-219ENST00000570273 GNG14A0A1W2PPG7 69 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 C4orf51C9J302 202 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 AGRPO00253 132 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 ZSCAN9O15535 394 aaPredicted RBP14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 CTSBP07858 339 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 PRPS2P11908 318 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 BCKDHAP12694 445 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 ACPPP15309 386 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 FOLR1P15328 257 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 NME5P56597 212 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 RAB8AP61006 207 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 TCTE1Q5JU00 501 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 ABHD17CQ6PCB6 329 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 CYP20A1Q6UW02 462 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 ABHD13Q7L211 337 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 TRPM8Q7Z2W7 1104 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 UBE3DQ7Z6J8 389 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 MIER2Q8N344 545 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 TTC29Q8NA56 475 aaPredicted RBP14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 CDC26Q8NHZ8 85 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 NETO1Q8TDF5 533 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 ZNF285Q96NJ3 590 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 TMEM74Q96NL1 305 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 QRFPRQ96P65 431 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 KCNC2Q96PR1 638 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 COPS7BQ9H9Q2 264 aaPredicted RBP14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 PCDHGA1Q9Y5H4 931 aa14.67□□□□□ -0.06
HERPUD1-219ENST00000570273 CAPN7Q9Y6W3 813 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms