RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 FDCSPQ8NFU4 85 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 OR6Y1Q8NGX8 325 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 SREK1Q8WXA9 508 aaKnown RBP13.76□□□□□ -0.21
COMMD4-225ENST00000569245 MIEF2Q96C03 454 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 FBXL8Q96CD0 374 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 MMABQ96EY8 250 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-225ENST00000569245 EGFL8Q99944 293 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 MECRQ9BV79 373 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 SGPP1Q9BX95 441 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 DRC3Q9H069 523 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 SLC26A1Q9H2B4 701 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 SYNPO2LQ9H987 977 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 TRPC4Q9UBN4 977 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 SH2B3Q9UQQ2 575 aa13.76□□□□□ -0.21
COMMD4-225ENST00000569245 PCDHGA9Q9Y5G4 932 aaKnown RBP13.76□□□□□ -0.21
COMMD4-225ENST00000569245 SNRNP200O75643 2136 aaKnown RBP13.76□□□□□ -0.21
COMMD4-225ENST00000569245 FEZF1A0PJY2 475 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 SUPT3HB4E1H0 165 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 STX16-NPEPL1H3BU86 382 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 STX16O14662 325 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 P2RX6O15547 441 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 H2AFYO75367 372 aaKnown RBP13.75□□□□□ -0.21
COMMD4-225ENST00000569245 SUPT3HO75486 399 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 PDGFAP04085 211 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 BGNP21810 368 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 MMP11P24347 488 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 CASRP41180 1078 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 CCR8P51685 355 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 ALDH18A1P54886 795 aaKnown RBP13.75□□□□□ -0.21
COMMD4-225ENST00000569245 CSNK1G2P78368 415 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 TLE1Q04724 770 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 RBBP7Q16576 425 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 DCAF10Q5QP82 559 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 OR56A3Q8NH54 315 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 ZNF75CPQ92670 426 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-225ENST00000569245 THAP11Q96EK4 314 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 MVB12AQ96EY5 273 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 SPSB2Q99619 263 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 MACROD1Q9BQ69 325 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 CRB3Q9BUF7 120 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 MANSC1Q9H8J5 431 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 ATP13A2Q9NQ11 1180 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 GPR83Q9NYM4 423 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 ZNF451Q9Y4E5 1061 aa13.75□□□□□ -0.21
COMMD4-225ENST00000569245 KCNE1BA0A087WTH5 132 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 A0A0A6YYC8 382 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-225ENST00000569245 VSTM2BA6NLU5 285 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 I3L1I5 382 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-225ENST00000569245 FFAR3O14843 346 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 GPR42O15529 346 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 S100BP04271 92 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-225ENST00000569245 SERPINE1P05121 402 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 ZGLP1P0C6A0 271 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 NEFHP12036 1026 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 GFAPP14136 432 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 IMPDH1P20839 514 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 GRK2P25098 689 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 AVPR1BP47901 424 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 NAA20P61599 178 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 GNGT1P63211 74 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 KLC1Q07866 573 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 DSG2Q14126 1118 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 SETDB1Q15047 1291 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 CHI3L2Q15782 390 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 VWA2Q5GFL6 755 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 TTC19Q6DKK2 380 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-225ENST00000569245 SULT1C3Q6IMI6 304 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 TCAIMQ8N3R3 496 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 GALNT16Q8N428 558 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 TBC1D19Q8N5T2 526 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 PTGR2Q8N8N7 351 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-225ENST00000569245 CAMKVQ8NCB2 501 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 STT3BQ8TCJ2 826 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 LRRC8CQ8TDW0 803 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 EXT2Q93063 718 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 NACC2Q96BF6 587 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 RHBDF1Q96CC6 855 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 L3HYPDHQ96EM0 354 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 VPS50Q96JG6 964 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 C1QTNF3Q9BXJ4 246 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 EPN3Q9H201 632 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 SEMA3GQ9NS98 782 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 CD274Q9NZQ7 290 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 C3orf18Q9UK00 162 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 FBXL4Q9UKA2 621 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 DYRK1BQ9Y463 629 aa13.74□□□□□ -0.21
COMMD4-225ENST00000569245 MASP2O00187 686 aa13.73□□□□□ -0.21
COMMD4-225ENST00000569245 OR1F1O43749 312 aa13.73□□□□□ -0.21
COMMD4-225ENST00000569245 SHOX2O60902 331 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-225ENST00000569245 CEACAM4O75871 244 aa13.73□□□□□ -0.21
COMMD4-225ENST00000569245 ALPPP05187 535 aa13.73□□□□□ -0.21
COMMD4-225ENST00000569245 SERPIND1P05546 499 aa13.73□□□□□ -0.21
COMMD4-225ENST00000569245 LSP1P33241 339 aa13.73□□□□□ -0.21
COMMD4-225ENST00000569245 SERPINB5P36952 375 aa13.73□□□□□ -0.21
COMMD4-225ENST00000569245 BCL6P41182 706 aa13.73□□□□□ -0.21
COMMD4-225ENST00000569245 HNMTP50135 292 aa13.73□□□□□ -0.21
COMMD4-225ENST00000569245 HERVK_113P63132 956 aa13.73□□□□□ -0.21
COMMD4-225ENST00000569245 MEF2AQ02078 507 aaPredicted RBP13.73□□□□□ -0.21
COMMD4-225ENST00000569245 KCNC4Q03721 635 aa13.73□□□□□ -0.21
COMMD4-225ENST00000569245 PFKFB4Q16877 469 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms