RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, human

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA3-206	ENST00000569062	CRB2	Q5IJ48	1285 aa		19	■□□□□ 0.63
ABCA3-206	ENST00000569062	ABHD13	Q7L211	337 aa		19	■□□□□ 0.63
ABCA3-206	ENST00000569062	CPEB2	Q7Z5Q1	589 aa	Known RBP	19	■□□□□ 0.63
ABCA3-206	ENST00000569062	TCAIM	Q8N3R3	496 aa		19	■□□□□ 0.63
ABCA3-206	ENST00000569062	TRPV3	Q8NET8	790 aa		19	■□□□□ 0.63
ABCA3-206	ENST00000569062	CREB3L4	Q8TEY5	395 aa		19	■□□□□ 0.63
ABCA3-206	ENST00000569062	EXT2	Q93063	718 aa		19	■□□□□ 0.63
ABCA3-206	ENST00000569062	KIAA1191	Q96A73	305 aa		19	■□□□□ 0.63
ABCA3-206	ENST00000569062	AICDA	Q9GZX7	198 aa		19	■□□□□ 0.63
ABCA3-206	ENST00000569062	LANCL2	Q9NS86	450 aa		19	■□□□□ 0.63
ABCA3-206	ENST00000569062	CD274	Q9NZQ7	290 aa		19	■□□□□ 0.63
ABCA3-206	ENST00000569062	RNF112	Q9ULX5	631 aa		19	■□□□□ 0.63
ABCA3-206	ENST00000569062	PCDHGA10	Q9Y5H3	936 aa		19	■□□□□ 0.63
ABCA3-206	ENST00000569062	CLEC18A	A5D8T8	446 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	CHST10	O43529	356 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	PRAMEF4	O60810	478 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	SEC24D	O94855	1032 aa	Predicted RBP	18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	CYC1	P08574	325 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	SMIM10L1	P0DMW3	83 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	ITGAM	P11215	1152 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	SOX11	P35716	441 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	RHAG	Q02094	409 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	BMPR2	Q13873	1038 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	SLBP	Q14493	270 aa	Known RBP eCLIP	18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	CDKL4	Q5MAI5	379 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	PRAMEF9	Q5VWM5	478 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	SULT1C3	Q6IMI6	304 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	CLEC18B	Q6UXF7	455 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	ANKRD37	Q7Z713	158 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	ISCA2	Q86U28	154 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	CLEC18C	Q8NCF0	446 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	PDPR	Q8NCN5	879 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	SMIM10	Q96HG1	83 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	CNDP1	Q96KN2	507 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	LMF1	Q96S06	567 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	TUBB6	Q9BUF5	446 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	ALG9	Q9H6U8	611 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	DNAJC11	Q9NVH1	559 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	NINJ2	Q9NZG7	142 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	PTBP2	Q9UKA9	531 aa	Known RBP	18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	NTNG1	Q9Y2I2	539 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	ASB1	Q9Y576	335 aa		18.99	■□□□□ 0.63
ABCA3-206	ENST00000569062	HMX2	A2RU54	273 aa		18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	H2AFY	O75367	372 aa	Known RBP	18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	STK16	O75716	305 aa		18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	SERPINA6	P08185	405 aa		18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	TFEB	P19484	476 aa		18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	MRPL49	Q13405	166 aa	Known RBP	18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	TOR1AIP1	Q5JTV8	583 aa		18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	MROH9	Q5TGP6	573 aa		18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	B3GNTL1	Q67FW5	361 aa	Predicted RBP	18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	TMIGD1	Q6UXZ0	262 aa		18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	RIPOR1	Q6ZS17	1223 aa		18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	CATSPER1	Q8NEC5	780 aa		18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	TSLP	Q969D9	159 aa		18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	OR1F2P	Q96R84	312 aa		18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	CNOT10	Q9H9A5	744 aa	Known RBP	18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	IGSF5	Q9NSI5	407 aa		18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	GPRC5B	Q9NZH0	403 aa		18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	C19orf25	Q9UFG5	118 aa	Predicted RBP	18.98	■□□□□ 0.63
ABCA3-206	ENST00000569062	URAD	A6NGE7	173 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	WFS1	O76024	890 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	FH	P07954	510 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	LTA4H	P09960	611 aa	Known RBP	18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	ICAM2	P13598	275 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	IL10	P22301	178 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	CRABP2	P29373	138 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	SKP1	P63208	163 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	IRF9	Q00978	393 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	ZNF169	Q14929	603 aa	Predicted RBP	18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	UAP1	Q16222	522 aa	Predicted RBP	18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	NIPAL1	Q6NVV3	410 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	TBC1D1	Q86TI0	1168 aa	Predicted RBP	18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	SNX31	Q8N9S9	440 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	PLPP5	Q8NEB5	264 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	STAG3L4	Q8TBR4	150 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	TBC1D20	Q96BZ9	403 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	NXNL1	Q96CM4	212 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	ATOH8	Q96SQ7	321 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	CAPS2	Q9BXY5	557 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	NMRAL1	Q9HBL8	299 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	PLA2G3	Q9NZ20	509 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	COPG2	Q9UBF2	871 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	MTRF1L	Q9UGC7	380 aa	Known RBP	18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	COPG1	Q9Y678	874 aa	Known RBP	18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	CNTRL	Q7Z7A1	2325 aa		18.97	■□□□□ 0.63
ABCA3-206	ENST00000569062	CLGN	O14967	610 aa		18.96	■□□□□ 0.63
ABCA3-206	ENST00000569062	CCNT2	O60583	730 aa	Known RBP	18.96	■□□□□ 0.63
ABCA3-206	ENST00000569062	F10	P00742	488 aa		18.96	■□□□□ 0.63
ABCA3-206	ENST00000569062	S100B	P04271	92 aa	Predicted RBP	18.96	■□□□□ 0.63
ABCA3-206	ENST00000569062	UQCRH	P07919	91 aa		18.96	■□□□□ 0.63
ABCA3-206	ENST00000569062	EPOR	P19235	508 aa		18.96	■□□□□ 0.63
ABCA3-206	ENST00000569062	PHB	P35232	272 aa		18.96	■□□□□ 0.63
ABCA3-206	ENST00000569062	AGTR2	P50052	363 aa		18.96	■□□□□ 0.63
ABCA3-206	ENST00000569062	ABRAXAS2	Q15018	415 aa		18.96	■□□□□ 0.63
ABCA3-206	ENST00000569062	NSDHL	Q15738	373 aa		18.96	■□□□□ 0.63
ABCA3-206	ENST00000569062	BTBD16	Q32M84	506 aa		18.96	■□□□□ 0.63
ABCA3-206	ENST00000569062	ADNP2	Q6IQ32	1131 aa		18.96	■□□□□ 0.63
ABCA3-206	ENST00000569062	CENPL	Q8N0S6	344 aa	Predicted RBP	18.96	■□□□□ 0.63

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms