RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 COILP38432 576 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 CLCN7P51798 805 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 GPR85P60893 370 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 MEF2AQ02078 507 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 EMC4Q5J8M3 183 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 CAPN13Q6MZZ7 669 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 PAOXQ6QHF9 649 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 PRUNE1Q86TP1 453 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 SLC26A11Q86WA9 606 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 SYCE1Q8N0S2 351 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 CYP4X1Q8N118 509 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 CYP4Z2PQ8N1L4 340 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 TMEM156Q8N614 296 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 OR5T3Q8NGG3 340 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 OR52N2Q8NGI0 321 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 RMND5BQ96G75 393 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 CCDC138Q96M89 665 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 ALPK1Q96QP1 1244 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 KIFC1Q9BW19 673 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 POLDIP3Q9BY77 421 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 DEFB126Q9BYW3 111 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 BFARQ9NZS9 450 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 KLHL42Q9P2K6 505 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 DRG1Q9Y295 367 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 VPS9D1Q9Y2B5 631 aa11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 RPH3AQ9Y2J0 694 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-209ENST00000568569 FEZF1A0PJY2 475 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 FIGNL2A6NMB9 653 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 GALR3O60755 368 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 B4GALT2O60909 372 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 TUBB4AP04350 444 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 MPC1LP0DKB6 136 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 DNASE1P24855 282 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 NPY2RP49146 381 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 CUL1Q13616 776 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 NIPAL1Q6NVV3 410 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 CES3Q6UWW8 571 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 QSOX2Q6ZRP7 698 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 C17orf64Q86WR6 236 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 CILP2Q8IUL8 1156 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 ZZZ3Q8IYH5 903 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 AFAP1L2Q8N4X5 818 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 PRELID2Q8N945 189 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 ZNF740Q8NDX6 193 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 OR10Q1Q8NGQ4 319 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 GIMAP7Q8NHV1 300 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 CREB3L4Q8TEY5 395 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 PTCHD1Q96NR3 888 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 SLC30A3Q99726 388 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 LACRTQ9GZZ8 138 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 CLEC4MQ9H2X3 399 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 TIMMDC1Q9NPL8 285 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 ZNF358Q9NW07 568 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 SYBUQ9NX95 663 aa11.02□□□□□ -0.65
GTF3C1-209ENST00000568569 DNAJC13O75165 2243 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 HCFC1P51610 2035 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 TRBV11-1A0A0K0K1C0 115 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 TCRBV16S1A1N1A0A5B0 115 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 OR14I1A6ND48 311 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 NPIPA2E9PIF3 369 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 NPIPA3F8WFD2 350 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 ACOT7O00154 380 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 NDUFS4O43181 175 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 CHST10O43529 356 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 LCMT2O60294 686 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 FTCDO95954 541 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 ALOX12P18054 663 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 PAMP19021 973 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 MGAT1P26572 445 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 ACVR2AP27037 513 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 ZFP36L2P47974 494 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 DLX5P56178 289 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 OLR1P78380 273 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 GXYLT1Q4G148 440 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 DEFB134Q4QY38 66 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 KIAA0930Q6ICG6 404 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 ARSKQ6UWY0 536 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 B3GNT6Q6ZMB0 384 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 UBE2R2Q712K3 238 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 CENPUQ71F23 418 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 MDGA2Q7Z553 956 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 MFSD9Q8NBP5 474 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 NFAM1Q8NET5 270 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 KCNJ9Q92806 393 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 GPATCH1Q9BRR8 931 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 DEFB127Q9H1M4 99 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 CCDC68Q9H2F9 335 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 LIME1Q9H400 295 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 PNPLA3Q9NST1 481 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 INTS10Q9NVR2 710 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 SOX13Q9UN79 622 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 SH2B3Q9UQQ2 575 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 PLEKHA6Q9Y2H5 1048 aa11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 REXO2Q9Y3B8 237 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-209ENST00000568569 JMJD1CQ15652 2540 aa11□□□□□ -0.65
GTF3C1-209ENST00000568569 IGKV3D-11A0A0A0MRZ8 115 aa11□□□□□ -0.65
GTF3C1-209ENST00000568569 BCKDKO14874 412 aa11□□□□□ -0.65
GTF3C1-209ENST00000568569 PROM1O43490 865 aa11□□□□□ -0.65
GTF3C1-209ENST00000568569 CEP104O60308 925 aa11□□□□□ -0.65
GTF3C1-209ENST00000568569 ITGA10O75578 1167 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms