RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 NAPRTQ6XQN6 538 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 SUMF2Q8NBJ7 301 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 LCN9Q8WX39 176 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 HOXB13Q92826 284 aaPredicted RBP4.94□□□□□ -1.62
SMG1-211ENST00000565324 FAIMQ9NVQ4 179 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 NFAT5O94916 1531 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 PRSS51A0A1B0GVH4 220 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 C9J4A7 227 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 NCBP2P52298 156 aaKnown RBP eCLIP4.94□□□□□ -1.62
SMG1-211ENST00000565324 FKBP1CQ5VVH2 108 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 SLC27A4Q6P1M0 643 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 KIAA1324Q6UXG2 1013 aaKnown RBP4.94□□□□□ -1.62
SMG1-211ENST00000565324 LRRC55Q6ZSA7 311 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 GATA5Q9BWX5 397 aaPredicted RBP4.94□□□□□ -1.62
SMG1-211ENST00000565324 ATG5Q9H1Y0 275 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 APMAPQ9HDC9 416 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 VPS29Q9UBQ0 182 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 A0A1W2PRB8 838 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 LRRC72A6NJI9 287 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 F8W036 122 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 WDPCPO95876 746 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 POU2F1P14859 743 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 MADCAM1Q13477 382 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 PDE12Q6L8Q7 609 aaKnown RBP4.94□□□□□ -1.62
SMG1-211ENST00000565324 SPATA6LQ8N4H0 392 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 MARVELD2Q8N4S9 558 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 NAT16Q8N8M0 369 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 OR52E4Q8NGH9 312 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 MTERF1Q99551 399 aaKnown RBP4.94□□□□□ -1.62
SMG1-211ENST00000565324 SLC35A5Q9BS91 424 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 MAGIXQ9H6Y5 334 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 D6RAR5 112 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 MRPS14O60783 128 aaKnown RBP4.94□□□□□ -1.62
SMG1-211ENST00000565324 PRAF2O60831 178 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 CREG1O75629 220 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 CDK14O94921 469 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 HOXA9P31269 272 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 MTPNP58546 118 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 TGFBIQ15582 683 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 TOP6BLQ8N6T0 577 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 SNAPC3Q92966 411 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 CHFRQ96EP1 664 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 UQCC2Q9BRT2 126 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 PARPBPQ9NWS1 579 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 RAI2Q9Y5P3 530 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 CDK5RAP2Q96SN8 1893 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 SOBPA7XYQ1 873 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 ADAM10O14672 748 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 LEPRP48357 1165 aaKnown RBP4.94□□□□□ -1.62
SMG1-211ENST00000565324 PON2Q15165 354 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 ZNF674Q2M3X9 581 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 COQ5Q5HYK3 327 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 MPP7Q5T2T1 576 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 ELP2Q6IA86 826 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 PLD5Q8N7P1 536 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 NIPA2Q8N8Q9 360 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 PLA2G15Q8NCC3 412 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 OR2T33Q8NG76 320 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 SLC7A13Q8TCU3 470 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 SLC35F5Q8WV83 523 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 SLCO2A1Q92959 643 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 FCRL2Q96LA5 508 aaPredicted RBP4.94□□□□□ -1.62
SMG1-211ENST00000565324 HS6ST2Q96MM7 605 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 HAPLN3Q96S86 360 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 TTYH2Q9BSA4 534 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 TM6SF2Q9BZW4 377 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 ABCG4Q9H172 646 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 DPEP2Q9H4A9 486 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 PTTG3PQ9NZH4 202 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 FZD4Q9ULV1 537 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 TIMM22Q9Y584 194 aa4.94□□□□□ -1.62
SMG1-211ENST00000565324 J3QRK9 145 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 SC5DO75845 299 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 RPP14O95059 124 aaKnown RBP4.93□□□□□ -1.62
SMG1-211ENST00000565324 L1CAMP32004 1257 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 FXYD6P3P58550 94 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 IL10RBQ08334 325 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 PDE4DIPQ5VU43 2346 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 C9orf57Q5W0N0 161 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 FRG2Q64ET8 278 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 CNOT9Q92600 299 aaKnown RBP4.93□□□□□ -1.62
SMG1-211ENST00000565324 PTPRUQ92729 1446 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 FBXL8Q96CD0 374 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 FRG2BQ96QU4 278 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.93□□□□□ -1.62
SMG1-211ENST00000565324 ATF5Q9Y2D1 282 aaPredicted RBP4.93□□□□□ -1.62
SMG1-211ENST00000565324 ADAM18Q9Y3Q7 739 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 OR6C75A6NL08 312 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 AGAP14A8MT82 685 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 CHRNB1P11230 501 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 BDKRB2P30411 391 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 EPHX2P34913 555 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 ASPAP45381 313 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 GLUD2P49448 558 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 CRYBB1P53674 252 aaPredicted RBP4.93□□□□□ -1.62
SMG1-211ENST00000565324 MRPS10P82664 201 aaKnown RBP4.93□□□□□ -1.62
SMG1-211ENST00000565324 DUOXA1Q1HG43 343 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 HES5Q5TA89 166 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 RHBDF2Q6PJF5 856 aa4.93□□□□□ -1.62
SMG1-211ENST00000565324 ATP6V1C2Q8NEY4 427 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms