RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 THOC6Q86W42 341 aaKnown RBP15.24■□□□□ 0.03
SNX1-213ENST00000561026 ZC3HC1Q86WB0 502 aaKnown RBP15.24■□□□□ 0.03
SNX1-213ENST00000561026 ANKMY2Q8IV38 441 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 SLC5A8Q8N695 610 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 MDS2Q8NDY4 140 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 UTP15Q8TED0 518 aaKnown RBP15.24■□□□□ 0.03
SNX1-213ENST00000561026 TRIM51Q9BSJ1 452 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 GRPEL1Q9HAV7 217 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 CLK4Q9HAZ1 481 aaKnown RBP15.24■□□□□ 0.03
SNX1-213ENST00000561026 MOCS1Q9NZB8 636 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 ZFATQ9P243 1243 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 LRBAP50851 2863 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 CTAGE15A4D2H0 777 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 USP27XA6NNY8 438 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 CDC7O00311 574 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 MAN1A2O60476 641 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 SAT1P21673 171 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 SLC26A5P58743 744 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 REEP5Q00765 189 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 PMP22Q01453 160 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 OR1C1Q15619 314 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.24■□□□□ 0.031e-6■□□□□ 10.6
SNX1-213ENST00000561026 NXPE4Q6UWF7 544 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 CTAGE6Q86UF2 777 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 NKAPQ8N5F7 415 aaKnown RBP15.24■□□□□ 0.03
SNX1-213ENST00000561026 ANKRD53Q8N9V6 530 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 TRPV3Q8NET8 790 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 SIGLEC12Q96PQ1 595 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 AIF1LQ9BQI0 150 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 UTP23Q9BRU9 249 aaKnown RBP15.24■□□□□ 0.03
SNX1-213ENST00000561026 SLC6A16Q9GZN6 736 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 PELI2Q9HAT8 420 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 ANKRD10Q9NXR5 420 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 COPG2Q9UBF2 871 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 ENTPD4Q9Y227 616 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 SLC22A14Q9Y267 594 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 DYRK1BQ9Y463 629 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 KCNE2Q9Y6J6 123 aa15.24■□□□□ 0.03
SNX1-213ENST00000561026 TRGV8A0A0C4DH27 118 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 FAM95CA0A1B0GW59 222 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 URADA6NGE7 173 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 TTI1O43156 1089 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 B4GALT2O60909 372 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 WISP2O76076 250 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 TAS2R39P59534 338 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 TAS2R50P59544 299 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 GNG11P61952 73 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 CDKL1Q00532 357 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 HYAL2Q12891 473 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 PDIA2Q13087 525 aaKnown RBP15.23■□□□□ 0.03
SNX1-213ENST00000561026 FASTKD3Q14CZ7 662 aaKnown RBP15.23■□□□□ 0.03
SNX1-213ENST00000561026 SPINK14Q6IE38 97 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 TICAM1Q8IUC6 712 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 LGI4Q8N135 537 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 FBXO36Q8NEA4 188 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 ELP5Q8TE02 316 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 PTCHD1Q96NR3 888 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 TRIM31Q9BZY9 425 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 SAR1BQ9Y6B6 198 aa15.23■□□□□ 0.03
SNX1-213ENST00000561026 NPEPPSL1A6NEC2 478 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 GABRR3A8MPY1 467 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 E7ESA3 106 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 CCDC188H7C350 402 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 PRMT3O60678 531 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 SERPINA6P08185 405 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 SMIM10L1P0DMW3 83 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 CD46P15529 392 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 HNF4AP41235 474 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 CA7P43166 264 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 HNMTP50135 292 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 ST13P50502 369 aaKnown RBP15.22■□□□□ 0.03
SNX1-213ENST00000561026 RAB8AP61006 207 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 BTG2P78543 158 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 RBPJQ06330 500 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 CBLBQ13191 982 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 ZNF460Q14592 562 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 RBBP5Q15291 538 aaKnown RBP15.22■□□□□ 0.03
SNX1-213ENST00000561026 SP5Q6BEB4 398 aaPredicted RBP15.22■□□□□ 0.03
SNX1-213ENST00000561026 QSOX2Q6ZRP7 698 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 TMPRSS11BQ86T26 416 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 HORMAD2Q8N7B1 307 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 CREB3L4Q8TEY5 395 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 ANKRD49Q8WVL7 239 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 SCMH1Q96GD3 660 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 SMIM10Q96HG1 83 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 HES7Q9BYE0 225 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 KLHL31Q9H511 634 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 KLHL1Q9NR64 748 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 OARD1Q9Y530 152 aa15.22■□□□□ 0.03
SNX1-213ENST00000561026 ASPDHA6ND91 283 aa15.21■□□□□ 0.02
SNX1-213ENST00000561026 EFCAB8A8MWE9 144 aa15.21■□□□□ 0.02
SNX1-213ENST00000561026 CCL21O00585 134 aa15.21■□□□□ 0.02
SNX1-213ENST00000561026 CDK2AP1O14519 115 aa15.21■□□□□ 0.02
SNX1-213ENST00000561026 NDC80O14777 642 aa15.21■□□□□ 0.02
SNX1-213ENST00000561026 HNRNPRO43390 633 aaKnown RBP15.21■□□□□ 0.02
SNX1-213ENST00000561026 NEURL1O76050 574 aa15.21■□□□□ 0.02
SNX1-213ENST00000561026 EEF1DP29692 281 aaKnown RBP15.21■□□□□ 0.02
SNX1-213ENST00000561026 OC90Q02509 493 aaPredicted RBP15.21■□□□□ 0.02
SNX1-213ENST00000561026 RPS19BP1Q86WX3 136 aaKnown RBP15.21■□□□□ 0.02
SNX1-213ENST00000561026 CEP97Q8IW35 865 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms