RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CCDC153Q494R4 210 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 GGTA1PQ4G0N0 100 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 TOR1AIP1Q5JTV8 583 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 ARHGAP40Q5TG30 622 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 ZNF793Q6ZN11 406 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 LRRC69Q6ZNQ3 347 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 OVCH1Q7RTY7 1134 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 LAPTM4BQ86VI4 370 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 C10orf107Q8IVU9 208 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 CNPY4Q8N129 248 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 CAMKVQ8NCB2 501 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 OR6Y1Q8NGX8 325 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 HUS1BQ8NHY5 278 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 TRPC4APQ8TEL6 797 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 FKBP10Q96AY3 582 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 TLCD1Q96CP7 247 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 MVB12AQ96EY5 273 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 FAM111AQ96PZ2 611 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 PITHD1Q9GZP4 211 aaPredicted RBP10.84□□□□□ -0.67
SNX1-204ENST00000559061 DRC3Q9H069 523 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 TMBIM4Q9HC24 238 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 DMRT3Q9NQL9 472 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 FARSBQ9NSD9 589 aaKnown RBP10.84□□□□□ -0.67
SNX1-204ENST00000559061 TXLNGQ9NUQ3 528 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 OXSMQ9NWU1 459 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 NDOR1Q9UHB4 597 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 TCFL5Q9UL49 500 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 GRID1Q9ULK0 1009 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 FARSAQ9Y285 508 aaKnown RBP10.84□□□□□ -0.67
SNX1-204ENST00000559061 NAALAD2Q9Y3Q0 740 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 TSC22D4Q9Y3Q8 395 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 SLC22A7Q9Y694 548 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 MED13Q9UHV7 2174 aa10.84□□□□□ -0.67
SNX1-204ENST00000559061 A0A0G2JN53 185 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 OR2W5A6NFC9 320 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 MASP2O00187 686 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 RGS16O15492 202 aaPredicted RBP10.83□□□□□ -0.68
SNX1-204ENST00000559061 ERLIN1O75477 346 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 SLC35G6P0C7Q6 338 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 DHRS4L1P0CG22 281 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 MYL2P10916 166 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 CPA3P15088 417 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 ALDH3A1P30838 453 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 HNF4AP41235 474 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 CCT5P48643 541 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 HTR6P50406 440 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 NEK2P51955 445 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 FOXA1P55317 472 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 RAB8AP61006 207 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 CDC20Q12834 499 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 ZRSR2Q15696 482 aaKnown RBP10.83□□□□□ -0.68
SNX1-204ENST00000559061 CPSF6Q16630 551 aaKnown RBP eCLIP10.83□□□□□ -0.68
SNX1-204ENST00000559061 DEFB134Q4QY38 66 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 VWA2Q5GFL6 755 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 LIPJQ5W064 366 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 MED27Q6P2C8 311 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 PRMT9Q6P2P2 845 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 CCDC81Q6ZN84 652 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 SHISA6Q6ZSJ9 500 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 FRMD7Q6ZUT3 714 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 PPP1R32Q7Z5V6 425 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 KRT78Q8N1N4 520 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 TRPV3Q8NET8 790 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 RDH11Q8TC12 318 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 AGAP11Q8TF27 550 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 TTC9Q92623 222 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 ARL8AQ96BM9 186 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 F2RL3Q96RI0 385 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 KCNA7Q96RP8 456 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 ZNF382Q96SR6 550 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 GATA5Q9BWX5 397 aaPredicted RBP10.83□□□□□ -0.68
SNX1-204ENST00000559061 SORBS1Q9BX66 1292 aaKnown RBP10.83□□□□□ -0.68
SNX1-204ENST00000559061 GPR87Q9BY21 358 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 SLC7A5P2Q9GIP4 190 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 ACTR8Q9H981 624 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 ZNF304Q9HCX3 659 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 PRDM7Q9NQW5 492 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 ZNF446Q9NWS9 450 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 HCN3Q9P1Z3 774 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 IFT80Q9P2H3 777 aaPredicted RBP10.83□□□□□ -0.68
SNX1-204ENST00000559061 CACNA1BQ00975 2339 aa10.83□□□□□ -0.68
SNX1-204ENST00000559061 SPENQ96T58 3664 aaKnown RBP10.82□□□□□ -0.68
SNX1-204ENST00000559061 MAGEB17A8MXT2 336 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 H0YIG0 161 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 RTCAO00442 366 aaKnown RBP10.82□□□□□ -0.68
SNX1-204ENST00000559061 TXNDC9O14530 226 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 H2AFYO75367 372 aaKnown RBP10.82□□□□□ -0.68
SNX1-204ENST00000559061 SH3BGRLO75368 114 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 SUPT7LO94864 414 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 OR4F21O95013 312 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 CLDN9O95484 217 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 RECKO95980 971 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 SERPIND1P05546 499 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 PRKAR1AP10644 381 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 ALOX12P18054 663 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 TAC1P20366 129 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 AGXTP21549 392 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 FBLP22087 321 aaKnown RBP10.82□□□□□ -0.68
SNX1-204ENST00000559061 CXCR2P25025 360 aa10.82□□□□□ -0.68
SNX1-204ENST00000559061 NAGLUP54802 743 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms