RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 A8MVM7 634 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 ANHXE9PGG2 379 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 O00370 1275 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 P2RY10O00398 339 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 CHUKO15111 745 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 MAGEB2O15479 319 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 ADAM12O43184 909 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 B4GAT1O43505 415 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 SCO2O43819 266 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 EXTL3O43909 919 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 FGF17O60258 216 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 ECE2O60344 883 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 GLRA3O75311 464 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 SAP30O75446 220 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 RAD51DO75771 328 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 CDC123O75794 336 aaPredicted RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 MT-ND2P03891 347 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 ALPPP05187 535 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 F7P08709 466 aaPredicted RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 FAM157CP0CG43 387 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 ERVK-10P10266 1014 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 ALPPL2P10696 532 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 GP1BBP13224 206 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 CPA3P15088 417 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 CA6P23280 308 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 ELAVL4P26378 380 aaKnown RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 MAPK3P27361 379 aaPredicted RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 AKT2P31751 481 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 SFNP31947 248 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 CETN2P41208 172 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 TNFSF10P50591 281 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 CNN1P51911 297 aaKnown RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 CSNK2BP67870 215 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 RPP38P78345 283 aaKnown RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 CETN1Q12798 172 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 LCP2Q13094 533 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 MSLNQ13421 630 aaPredicted RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 HNRNPDQ14103 355 aaKnown RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 TMEM132DQ14C87 1099 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 KARSQ15046 597 aaKnown RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 KRT31Q15323 416 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 TAF13Q15543 124 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 ZNF74Q16587 644 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 ZNF672Q499Z4 452 aaPredicted RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 LRRC37A5PQ49AS3 106 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 GTDC1Q4AE62 458 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 TAF1BQ53T94 588 aaPredicted RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 ARMCX4Q5H9R4 360 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 FFAR4Q5NUL3 377 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 CCNYL2Q5T2Q4 361 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 C20orf194Q5TEA3 1177 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 STPG1Q5TH74 334 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 LCN1P1Q5VSP4 162 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 OR6B2Q6IFH4 312 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 FAM53AQ6NSI3 398 aaPredicted RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 FBXL22Q6P050 247 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 GDPD4Q6W3E5 623 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 LEKR1Q6ZMV7 388 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 WDR88Q6ZMY6 472 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 C18orf65Q6ZTR6 163 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 TRMT11Q7Z4G4 463 aaKnown RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 EXOC3L1Q86VI1 746 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 LACC1Q8IV20 430 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 WDR49Q8IV35 697 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 PRSS35Q8N3Z0 413 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 RFLNBQ8N5W9 214 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 TCEANCQ8N8B7 351 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 TMEM178AQ8NBL3 297 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 ADAD2Q8NCV1 583 aaKnown RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 CCNYQ8ND76 341 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 TRPV3Q8NET8 790 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 TMEM185AQ8NFB2 350 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 OR1L3Q8NH93 324 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 EXOC6Q8TAG9 804 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 SPATA18Q8TC71 538 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 KIAA1524Q8TCG1 905 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 APOBEC4Q8WW27 367 aaKnown RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 SMPDL3AQ92484 453 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 SEPT8Q92599 483 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 HAS2Q92819 552 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 BPIFA2Q96DR5 249 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 MRPL53Q96EL3 112 aaKnown RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 C16orf58Q96GQ5 468 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 CXorf58Q96LI9 332 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 C2orf48Q96LS8 159 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 FAM218AQ96MZ4 157 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 NODALQ96S42 347 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 CDCA3Q99618 268 aaPredicted RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 MEIS3Q99687 375 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 PANK2Q9BZ23 570 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 KRT23Q9C075 422 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 SIRPDQ9H106 197 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 MTIF3Q9H2K0 278 aaKnown RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 ZNF665Q9H7R5 613 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 RPF1Q9H9Y2 349 aaKnown RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 ZNF556Q9HAH1 456 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 MAGEF1Q9HAY2 307 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 GPN1Q9HCN4 374 aaPredicted RBP1.45□□□□□ -2.18
USP3-209ENST00000558925 SDF2L1Q9HCN8 221 aa1.45□□□□□ -2.18
USP3-209ENST00000558925 ZNF71Q9NQZ8 489 aaPredicted RBP1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms