RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 TMEM53Q6P2H8 277 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 ANO5Q75V66 913 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 MARK2Q7KZI7 788 aaKnown RBP1.55□□□□□ -2.16
HIF1A-212ENST00000557538 ASPGQ86U10 573 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 SLC51BQ86UW2 128 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 FOXP4Q8IVH2 680 aaPredicted RBP1.55□□□□□ -2.16
HIF1A-212ENST00000557538 CCDC60Q8IWA6 550 aaPredicted RBP1.55□□□□□ -2.16
HIF1A-212ENST00000557538 RYBPQ8N488 228 aaPredicted RBP1.55□□□□□ -2.16
HIF1A-212ENST00000557538 FBXO39Q8N4B4 442 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 ZBTB44Q8NCP5 570 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 ZNF680Q8NEM1 530 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 OR1J1Q8NGS3 322 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 NCOA7Q8NI08 942 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 SGK3Q96BR1 496 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 ZNF524Q96C55 264 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 LGALS12Q96DT0 336 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 ARL5BQ96KC2 179 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 F2RL3Q96RI0 385 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 KRT12Q99456 494 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 RIOK1Q9BRS2 568 aaKnown RBP1.55□□□□□ -2.16
HIF1A-212ENST00000557538 LLPHQ9BRT6 129 aaKnown RBP1.55□□□□□ -2.16
HIF1A-212ENST00000557538 PINK1Q9BXM7 581 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 TRPV6Q9H1D0 765 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 ZDHHC6Q9H6R6 413 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 ZNHIT6Q9NWK9 470 aaKnown RBP1.55□□□□□ -2.16
HIF1A-212ENST00000557538 GDAP2Q9NXN4 497 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 ASIC3Q9UHC3 531 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 PTBP2Q9UKA9 531 aaKnown RBP1.55□□□□□ -2.16
HIF1A-212ENST00000557538 CLEC4AQ9UMR7 237 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 GAB2Q9UQC2 676 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 C15orf41Q9Y2V0 281 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 LRP12Q9Y561 859 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 KIF21AQ7Z4S6 1674 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 TRIP12Q14669 1992 aaPredicted RBP1.55□□□□□ -2.16
HIF1A-212ENST00000557538 IGSF1Q8N6C5 1336 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 CPSF1Q10570 1443 aaKnown RBP1.55□□□□□ -2.16
HIF1A-212ENST00000557538 ERICH3Q5RHP9 1530 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 KIAA1217Q5T5P2 1943 aa1.55□□□□□ -2.16
HIF1A-212ENST00000557538 A0A0B4J293 547 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ACOD1A6NK06 481 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 TMEM150CB9EJG8 249 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 NPIPA3F8WFD2 350 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 H3BQ06 376 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ZW10O43264 779 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 CACNG3O60359 315 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 FMO6PO60774 539 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 LUC7L3O95232 432 aaKnown RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 NPPAP01160 153 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 EDN1P05305 212 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 GPIP06744 558 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 PNMA6AP0CW24 399 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 IRF2P14316 349 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 FERP16591 822 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 STMN1P16949 149 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 GABRA5P31644 462 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 OR3A3P47888 321 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 SNU13P55769 128 aaKnown RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 CD81P60033 236 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 STX1BP61266 288 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 RPS18P62269 152 aaKnown RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 AKAP17AQ02040 695 aaKnown RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 GCNT1Q02742 428 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 HNRNPDQ14103 355 aaKnown RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 TAF13Q15543 124 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 DPYSL2Q16555 572 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 KIAA1644Q3SXP7 199 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 FAM182AQ5T1J6 154 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 LYSMD4Q5XG99 296 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ENPP7Q6UWV6 458 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 STOX1Q6ZVD7 989 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 SLC24A5Q71RS6 500 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ARHGAP22Q7Z5H3 698 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 PIGZQ86VD9 579 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 FAM89BQ8N5H3 189 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 TMEM99Q8N816 258 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 NIPA2Q8N8Q9 360 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 GBP7Q8N8V2 638 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 OR6J1Q8NGC5 347 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 MGARPQ8TDB4 240 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 TMEM237Q96Q45 408 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ATP6V0BQ99437 205 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 PARK7Q99497 189 aaKnown RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 HNRNPABQ99729 332 aaKnown RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 PUS3Q9BZE2 481 aaKnown RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 DNAI2Q9GZS0 605 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 LHX5Q9H2C1 402 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 GORASP2Q9H8Y8 452 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ZNF334Q9HCZ1 680 aaPredicted RBP1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ZFP57Q9NU63 452 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 SLC38A7Q9NVC3 462 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 IL36AQ9UHA7 158 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 FBXL4Q9UKA2 621 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 MYOM3Q5VTT5 1437 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 ERBINQ96RT1 1412 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 YEATS2Q9ULM3 1422 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 FGD5Q6ZNL6 1462 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 CCDC69A6NI79 296 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 NDUFAB1O14561 156 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 CXCL11O14625 94 aa1.54□□□□□ -2.16
HIF1A-212ENST00000557538 SMPD2O60906 423 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms