RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PPIGQ13427 754 aaKnown RBP eCLIP8.58□□□□□ -1.04
SYNE3-205ENST00000557275 SLC9A9Q8IVB4 645 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 SUMF2Q8NBJ7 301 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF675Q8TD23 568 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 ZDHHC12Q96GR4 267 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 CPB2Q96IY4 423 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 RBP7Q96R05 134 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 MRPS30Q9NP92 439 aaKnown RBP8.58□□□□□ -1.04
SYNE3-205ENST00000557275 P2RX6O15547 441 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 SLC18A2Q05940 514 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 IRF5Q13568 498 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 LPCAT4Q643R3 524 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 IQCHQ86VS3 1027 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 MAP4K3Q8IVH8 894 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 CHFRQ96EP1 664 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 GAD1Q99259 594 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 NACAE9PAV3 2078 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 MRPS14O60783 128 aaKnown RBP8.58□□□□□ -1.04
SYNE3-205ENST00000557275 BDKRB2P30411 391 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 AKR1C2P52895 323 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 RFTN1Q14699 578 aaPredicted RBP8.58□□□□□ -1.04
SYNE3-205ENST00000557275 POGLUT1Q8NBL1 392 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 OR10R2Q8NGX6 335 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 CHD2O14647 1828 aaKnown RBP8.58□□□□□ -1.04
SYNE3-205ENST00000557275 A0A1W2PS29 197 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF701M0R085 212 aaPredicted RBP8.58□□□□□ -1.04
SYNE3-205ENST00000557275 DIRAS1O95057 198 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 WDPCPO95876 746 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 MAP2K3P46734 347 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 RAB11BQ15907 218 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 GK5Q6ZS86 529 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 ZFP82Q8N141 532 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 CAMKVQ8NCB2 501 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 NTAN1Q96AB6 310 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 TMED9Q9BVK6 235 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 KCNQ5Q9NR82 932 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 FAM120CQ9NX05 1096 aaKnown RBP8.58□□□□□ -1.04
SYNE3-205ENST00000557275 HTR3BO95264 441 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 FNTBP49356 437 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 RTP1P59025 263 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 DSC3Q14574 896 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 LYRM7Q5U5X0 104 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 FAM151BQ6UXP7 276 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 MARCH10Q8NA82 808 aaPredicted RBP8.58□□□□□ -1.04
SYNE3-205ENST00000557275 LCN9Q8WX39 176 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 FAM84BQ96KN1 310 aaPredicted RBP8.58□□□□□ -1.04
SYNE3-205ENST00000557275 TVP23BQ9NYZ1 205 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 CNTN6Q9UQ52 1028 aa8.58□□□□□ -1.04
SYNE3-205ENST00000557275 HEXBP07686 556 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF33AQ06730 810 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 TROAPQ12815 778 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 IKBKEQ14164 716 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 SNX29P2Q8IUI4 249 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 TMEM199Q8N511 208 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 OR8K3Q8NH51 312 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 EPS8L1Q8TE68 723 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 AGO3Q9H9G7 860 aaKnown RBP8.57□□□□□ -1.04
SYNE3-205ENST00000557275 ELP3Q9H9T3 547 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.57□□□□□ -1.04
SYNE3-205ENST00000557275 MRPS17Q9Y2R5 130 aaKnown RBP8.57□□□□□ -1.04
SYNE3-205ENST00000557275 UBE2J1Q9Y385 318 aaPredicted RBP8.57□□□□□ -1.04
SYNE3-205ENST00000557275 RNF215Q9Y6U7 377 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 USP31Q70CQ4 1352 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 MEGF11A6BM72 1044 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 GPR89AB7ZAQ6 455 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 INPPL1O15357 1258 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 GPR89BP0CG08 455 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 FPR1P21462 350 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 FABP6P51161 128 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 GBE1Q04446 702 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 MFSD13AQ14CX5 517 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 GPR157Q5UAW9 335 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 MARCH9Q86YJ5 346 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 TRAM1L1Q8N609 369 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 OR52E4Q8NGH9 312 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 CNOT9Q92600 299 aaKnown RBP8.57□□□□□ -1.04
SYNE3-205ENST00000557275 MYOCQ99972 504 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 ZCCHC11Q5TAX3 1644 aaKnown RBP8.57□□□□□ -1.04
SYNE3-205ENST00000557275 FXYD6P3P58550 94 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 C3orf58Q8NDZ4 430 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 IRGQQ8WZA9 623 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 GCDHQ92947 438 aaPredicted RBP8.57□□□□□ -1.04
SYNE3-205ENST00000557275 FEM1CQ96JP0 617 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 Q9N2J8 555 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 DHDHQ9UQ10 334 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF43P17038 809 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 MINDY4Q4G0A6 757 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 HS6ST2Q96MM7 605 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF416Q9BWM5 594 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 SLC29A3Q9BZD2 475 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 TSPAN8P19075 237 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 GUK1Q16774 197 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 TEX44Q53QW1 395 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 CES3Q6UWW8 571 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 OR6T1Q8NGN1 323 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 TSPEARQ8WU66 669 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 OR1E3Q8WZA6 343 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 IL4I1Q96RQ9 567 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 G6PC3Q9BUM1 346 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 DLC1Q96QB1 1528 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms