RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 XCR1P46094 333 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 AGTR2P50052 363 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 PLTPP55058 493 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 ARG2P78540 354 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 TIAL1Q01085 375 aaKnown RBP eCLIP6.94□□□□□ -1.32e-6■■■□□ 18.2
SCFD1-222ENST00000556768 ACTN3Q08043 901 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-222ENST00000556768 CDC16Q13042 620 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 USP10Q14694 798 aaKnown RBP6.94□□□□□ -1.3
SCFD1-222ENST00000556768 CRB2Q5IJ48 1285 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 FAAH2Q6GMR7 532 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 SYT10Q6XYQ8 523 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 MBOAT1Q6ZNC8 495 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 LINC00696Q6ZRV3 163 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 GK5Q6ZS86 529 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 Q6ZS92 163 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 CYS1Q717R9 158 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 CCDC25Q86WR0 208 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 CTAGE3PQ8IX95 158 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 CISD2Q8N5K1 135 aaKnown RBP6.94□□□□□ -1.3
SCFD1-222ENST00000556768 TRPV3Q8NET8 790 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 ABHD11Q8NFV4 315 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 OR9A4Q8NGU2 314 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 OR56A3Q8NH54 315 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 PPP4R1Q8TF05 950 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 SLC5A11Q8WWX8 675 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 C8orf44Q96CB5 159 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 OLFM1Q99784 485 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 CPNE1Q99829 537 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 WDR77Q9BQA1 342 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-222ENST00000556768 TUBB6Q9BUF5 446 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 POPDC3Q9HBV1 291 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 MRPS2Q9Y399 296 aaKnown RBP6.94□□□□□ -1.3
SCFD1-222ENST00000556768 PIKFYVEQ9Y2I7 2098 aa6.94□□□□□ -1.3
SCFD1-222ENST00000556768 A0A088AWK7 358 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 TRBC2A0A5B9 178 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 PSMD12O00232 456 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-222ENST00000556768 RAD51CO43502 376 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 ALOX12BO75342 701 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 PRR35P0CG20 571 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 IL1RNP18510 177 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 ZNF10P21506 573 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-222ENST00000556768 GNLYP22749 145 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 JAK1P23458 1154 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 SPRP35270 261 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-222ENST00000556768 AHRP35869 848 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 CDKL1Q00532 357 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 CKAP4Q07065 602 aaKnown RBP6.93□□□□□ -1.3
SCFD1-222ENST00000556768 FASTKD3Q14CZ7 662 aaKnown RBP6.93□□□□□ -1.3
SCFD1-222ENST00000556768 RBBP5Q15291 538 aaKnown RBP6.93□□□□□ -1.3
SCFD1-222ENST00000556768 NSDHLQ15738 373 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 ABHD17BQ5VST6 288 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 B3GNTL1Q67FW5 361 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-222ENST00000556768 CEP128Q6ZU80 1094 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 RAPH1Q70E73 1250 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 THOC6Q86W42 341 aaKnown RBP6.93□□□□□ -1.3
SCFD1-222ENST00000556768 TCAIMQ8N3R3 496 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 DTWD1Q8N5C7 304 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 AMER3Q8N944 861 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 MFSD9Q8NBP5 474 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 TTLQ8NG68 377 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 OR4K1Q8NGD4 311 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 SNRNP40Q96DI7 357 aaKnown RBP6.93□□□□□ -1.3
SCFD1-222ENST00000556768 FAR2Q96K12 515 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 CYTH2Q99418 400 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.93□□□□□ -1.3
SCFD1-222ENST00000556768 CLK4Q9HAZ1 481 aaKnown RBP6.93□□□□□ -1.3
SCFD1-222ENST00000556768 STMN3Q9NZ72 180 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 ABI3Q9P2A4 366 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 PTGFRNQ9P2B2 879 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 SLC17A6Q9P2U8 582 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 ZFP69BQ9UJL9 534 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 SLC22A14Q9Y267 594 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 NAALAD2Q9Y3Q0 740 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 PSAT1Q9Y617 370 aa6.93□□□□□ -1.3
SCFD1-222ENST00000556768 IGHV1-45A0A0A0MS14 117 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 A8MUI8 341 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 TCP11X1B4DZS4 312 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 SGK494L7N484 410 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 MASP2O00187 686 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 FFAR3O14843 346 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 GPR42O15529 346 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 P2RX6O15547 441 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 LCMT2O60294 686 aaKnown RBP6.92□□□□□ -1.3
SCFD1-222ENST00000556768 MED26O95402 600 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 STATHP02808 62 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 COX6A1P12074 109 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 ALOX12P18054 663 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 SSTR1P30872 391 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 STX2P32856 288 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 GP5P40197 560 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 TAS2R39P59534 338 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 ATP6V0D1P61421 351 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 MRPS25P82663 173 aaKnown RBP6.92□□□□□ -1.3
SCFD1-222ENST00000556768 MAT1AQ00266 395 aaKnown RBP6.92□□□□□ -1.3
SCFD1-222ENST00000556768 EEF1A2Q05639 463 aaKnown RBP6.92□□□□□ -1.3
SCFD1-222ENST00000556768 MFAP5Q13361 173 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 ZNF169Q14929 603 aaPredicted RBP6.92□□□□□ -1.3
SCFD1-222ENST00000556768 SYT16Q17RD7 645 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 GRTP1Q5TC63 336 aa6.92□□□□□ -1.3
SCFD1-222ENST00000556768 FIGNL1Q6PIW4 674 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms