RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 CHST10O43529 356 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 CEP104O60308 925 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 KRT14P02533 472 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 FHP07954 510 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 SMIM10L1P0DMW3 83 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 MYBL2P10244 700 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 ESRRAP11474 423 aaPredicted RBP13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 CD46P15529 392 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 PTGER1P34995 402 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 SMSP52788 366 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 OR4D2P58180 307 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 MLF1P58340 268 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 BTG2P78543 158 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 THOC5Q13769 683 aaKnown RBP13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 HSP90AA5PQ58FG0 334 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 PAQR3Q6TCH7 311 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 SLC5A8Q8N695 610 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 TMEM178AQ8NBL3 297 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 C2CD4AQ8NCU7 369 aaPredicted RBP13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 OR56A3Q8NH54 315 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 MCOLN3Q8TDD5 553 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 MAIP1Q8WWC4 291 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 TBC1D20Q96BZ9 403 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 PYCR2Q96C36 320 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 SMIM10Q96HG1 83 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 OLFM1Q99784 485 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 PCBD2Q9H0N5 130 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 C20orf96Q9NUD7 363 aaPredicted RBP13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 LRFN1Q9P244 771 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 COMMD10Q9Y6G5 202 aa13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 HRNRQ86YZ3 2850 aaPredicted RBP13.45□□□□□ -0.26
CHMP4BP1-201ENST00000556017 VPS13CQ709C8 3753 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 E9PLN8 166 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 NDC80O14777 642 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 SLC25A12O75746 678 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 KRT38O76015 456 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 IL10P22301 178 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 SSTR2P30874 369 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 TRHRP34981 398 aaPredicted RBP13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 CASP6P55212 293 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 OC90Q02509 493 aaPredicted RBP13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 MAPKAPK3Q16644 382 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 DEFB134Q4QY38 66 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 CATSPEREQ5SY80 951 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 UGT3A1Q6NUS8 523 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 SPNS3Q6ZMD2 512 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 GHDCQ8N2G8 530 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 ANKRD53Q8N9V6 530 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 UTP15Q8TED0 518 aaKnown RBP13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 VKORC1Q9BQB6 163 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 CCDC68Q9H2F9 335 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 XAB2Q9HCS7 855 aaKnown RBP13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 LZTFL1Q9NQ48 299 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 NECTIN3Q9NQS3 549 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 IARS2Q9NSE4 1012 aaKnown RBP13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 SAMD15Q9P1V8 674 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 SLC17A6Q9P2U8 582 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 ZNF223Q9UK11 482 aaPredicted RBP13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 ITGB1BP2Q9UKP3 347 aa13.44□□□□□ -0.26
CHMP4BP1-201ENST00000556017 TCRBV16S1A1N1A0A5B0 115 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 TGFBR3LH3BV60 316 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 SLC16A5O15375 505 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 NDUFS4O43181 175 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 BANF1O75531 89 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 C8GP07360 202 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 SLC35G6P0C7Q6 338 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 ZNF888P0CJ79 500 aaPredicted RBP13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 ALOX12P18054 663 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 MAOAP21397 527 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 SARNPP82979 210 aaKnown RBP13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 TFF3Q07654 80 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 ACTN3Q08043 901 aaPredicted RBP13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 SP140Q13342 867 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 PWP1Q13610 501 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 HERC3Q15034 1050 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 CYP1B1Q16678 543 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 CMPK2Q5EBM0 449 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 EMC4Q5J8M3 183 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 QSOX2Q6ZRP7 698 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 STRA8Q7Z7C7 330 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 LMNTD2Q8IXW0 634 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 RASGEF1CQ8N431 466 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 APCDD1LQ8NCL9 501 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 NT5CQ8TCD5 201 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 SNF8Q96H20 258 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 MS4A14Q96JA4 679 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 FAM129AQ9BZQ8 928 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 SLC6A16Q9GZN6 736 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 KLHL31Q9H511 634 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 GPAMQ9HCL2 828 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 NPDC1Q9NQX5 325 aaPredicted RBP13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 PLSCR2Q9NRY7 297 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 HOMER3Q9NSC5 361 aa13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 TRMT6Q9UJA5 497 aaKnown RBP13.43□□□□□ -0.26
CHMP4BP1-201ENST00000556017 NIPBLQ6KC79 2804 aaeCLIP13.42□□□□□ -0.26
CHMP4BP1-201ENST00000556017 TRBC2A0A5B9 178 aa13.42□□□□□ -0.26
CHMP4BP1-201ENST00000556017 SAGE2PA6NJ88 616 aa13.42□□□□□ -0.26
CHMP4BP1-201ENST00000556017 CDK2AP1O14519 115 aa13.42□□□□□ -0.26
CHMP4BP1-201ENST00000556017 OR1F1O43749 312 aa13.42□□□□□ -0.26
CHMP4BP1-201ENST00000556017 B4GALT2O60909 372 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms