RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 FCRL4Q96PJ5 515 aa10.53□□□□□ -0.72
TMEM260-208ENST00000555905 F2RL3Q96RI0 385 aa10.53□□□□□ -0.72
TMEM260-208ENST00000555905 REXO4Q9GZR2 422 aaKnown RBP10.53□□□□□ -0.72
TMEM260-208ENST00000555905 FANCEQ9HB96 536 aa10.53□□□□□ -0.72
TMEM260-208ENST00000555905 MRGBPQ9NV56 204 aa10.53□□□□□ -0.72
TMEM260-208ENST00000555905 IRAK4Q9NWZ3 460 aa10.53□□□□□ -0.72
TMEM260-208ENST00000555905 EIF3LQ9Y262 564 aaKnown RBP10.53□□□□□ -0.72
TMEM260-208ENST00000555905 TMED5Q9Y3A6 229 aa10.53□□□□□ -0.72
TMEM260-208ENST00000555905 PCDHGA1Q9Y5H4 931 aa10.53□□□□□ -0.72
TMEM260-208ENST00000555905 SAP18O00422 153 aaKnown RBP10.52□□□□□ -0.73
TMEM260-208ENST00000555905 ZSCAN9O15535 394 aaPredicted RBP10.52□□□□□ -0.73
TMEM260-208ENST00000555905 ETHE1O95571 254 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 STATHP02808 62 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 HNRNPH1P31943 449 aaKnown RBP10.52□□□□□ -0.73
TMEM260-208ENST00000555905 IRX1P78414 480 aaPredicted RBP10.52□□□□□ -0.73
TMEM260-208ENST00000555905 TUBB3Q13509 450 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 KCNAB1Q14722 419 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 RPS6KA2Q15349 733 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 DEFB110Q30KQ9 67 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 TCTE1Q5JU00 501 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 WASHC2DQ5SRD0 308 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 TRIM40Q6P9F5 258 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 ABHD13Q7L211 337 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 PAGE2Q7Z2X7 111 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 ARHGAP22Q7Z5H3 698 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 GLRX5Q86SX6 157 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 MTDHQ86UE4 582 aaKnown RBP10.52□□□□□ -0.73
TMEM260-208ENST00000555905 SLITRK4Q8IW52 837 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 C1orf52Q8N6N3 182 aaKnown RBP10.52□□□□□ -0.73
TMEM260-208ENST00000555905 DEFB124Q8NES8 71 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 CHTF18Q8WVB6 975 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 APIPQ96GX9 242 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 QRFPRQ96P65 431 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 LRRC37BQ96QE4 947 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 MACROD1Q9BQ69 325 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 MRPL1Q9BYD6 325 aaKnown RBP10.52□□□□□ -0.73
TMEM260-208ENST00000555905 SLC6A16Q9GZN6 736 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 NOP53Q9NZM5 478 aaKnown RBP10.52□□□□□ -0.73
TMEM260-208ENST00000555905 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.52□□□□□ -0.73
TMEM260-208ENST00000555905 GIMAP2Q9UG22 337 aa10.52□□□□□ -0.73
TMEM260-208ENST00000555905 G3BP2Q9UN86 482 aaKnown RBP10.52□□□□□ -0.73
TMEM260-208ENST00000555905 RUVBL1Q9Y265 456 aaKnown RBP10.52□□□□□ -0.73
TMEM260-208ENST00000555905 EP300Q09472 2414 aaPredicted RBP10.52□□□□□ -0.73
TMEM260-208ENST00000555905 A0A088AWK7 358 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 ARHGAP10A1A4S6 786 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 TMEM150CB9EJG8 249 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 TMX2-CTNND1H3BSU7 103 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 P2RX6O15547 441 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 ERI3O43414 337 aaKnown RBP10.51□□□□□ -0.73
TMEM260-208ENST00000555905 GFRA3O60609 400 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 TBX6O95947 436 aaPredicted RBP10.51□□□□□ -0.73
TMEM260-208ENST00000555905 MSL3P1P0C860 447 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 IDO1P14902 403 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 ACPPP15309 386 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 PCSK2P16519 638 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 ZNF10P21506 573 aaPredicted RBP10.51□□□□□ -0.73
TMEM260-208ENST00000555905 CSTF2P33240 577 aaKnown RBP eCLIP10.51□□□□□ -0.73
TMEM260-208ENST00000555905 ARFIP1P53367 373 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 STX1BP61266 288 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 ACY1Q03154 408 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 ZFP36L1Q07352 338 aaKnown RBP10.51□□□□□ -0.73
TMEM260-208ENST00000555905 TBL3Q12788 808 aaKnown RBP10.51□□□□□ -0.73
TMEM260-208ENST00000555905 GSTA3Q16772 222 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 NDUFA9Q16795 377 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 ADPRMQ3LIE5 342 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 RFTN2Q52LD8 501 aaPredicted RBP10.51□□□□□ -0.73
TMEM260-208ENST00000555905 IL23RQ5VWK5 629 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 TMEM198Q66K66 360 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 NOXRED1Q6NXP6 359 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 CYB5D1Q6P9G0 228 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 COMMD6Q7Z4G1 85 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 KIAA2013Q8IYS2 634 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 GPR135Q8IZ08 494 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 FAM9CQ8IZT9 166 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 METTL4Q8N3J2 472 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 TTC29Q8NA56 475 aaPredicted RBP10.51□□□□□ -0.73
TMEM260-208ENST00000555905 RCBTB1Q8NDN9 531 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 OR2L5Q8NG80 312 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 GAL3ST3Q96A11 431 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 MS4A6EQ96DS6 147 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 CATSPER2Q96P56 530 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 KCNC2Q96PR1 638 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 C17orf62Q9BQA9 187 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 TBCDQ9BTW9 1192 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 C1orf50Q9BV19 199 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 STRADBQ9C0K7 418 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 ROGDIQ9GZN7 287 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 KLHL31Q9H511 634 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 SYNPO2LQ9H987 977 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 COPS7BQ9H9Q2 264 aaPredicted RBP10.51□□□□□ -0.73
TMEM260-208ENST00000555905 ASIC5Q9NY37 505 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 AKAP7Q9P0M2 348 aaPredicted RBP10.51□□□□□ -0.73
TMEM260-208ENST00000555905 SERTAD3Q9UJW9 196 aa10.51□□□□□ -0.73
TMEM260-208ENST00000555905 POLR3HQ9Y535 204 aaPredicted RBP10.51□□□□□ -0.73
TMEM260-208ENST00000555905 ADAMTS20P59510 1910 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 ZFHX2Q9C0A1 2572 aaPredicted RBP10.5□□□□□ -0.73
TMEM260-208ENST00000555905 GNG14A0A1W2PPG7 69 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 PLPP1O14494 284 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 FCHO1O14526 889 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 HCRTR1O43613 425 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms