RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ZDHHC12Q96GR4 267 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 EGLN2Q96KS0 407 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 PPP3R2Q96LZ3 170 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 SPRTNQ9H040 489 aaPredicted RBP10.26□□□□□ -0.77
TDP1-211ENST00000555178 ACTL8Q9H568 366 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 BRF2Q9HAW0 419 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 APMAPQ9HDC9 416 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 LHX9Q9NQ69 397 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 SEMA5BQ9P283 1151 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 PDP2Q9P2J9 529 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 KLK4Q9Y5K2 254 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 GPR45Q9Y5Y3 372 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 SERTM1A2A2V5 107 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 ANKRD65E5RJM6 399 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 H3BMH7 237 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 FOXE1O00358 373 aaPredicted RBP10.26□□□□□ -0.77
TDP1-211ENST00000555178 PLPP1O14494 284 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 EIF2S1P05198 315 aaKnown RBP10.26□□□□□ -0.77
TDP1-211ENST00000555178 SDC1P18827 310 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 GPX3P22352 226 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 PIK3R1P27986 724 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 PIK3CBP42338 1070 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 UFM1P61960 85 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 INAVAQ3KP66 663 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 PHF19Q5T6S3 580 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 RNF44Q7L0R7 432 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 MFSD9Q8NBP5 474 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 OR4D9Q8NGE8 314 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 FBXO27Q8NI29 283 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 KLHL6Q8WZ60 621 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 UBE2E3Q969T4 207 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 ZUFSPQ96AP4 578 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 C11orf24Q96F05 449 aaPredicted RBP10.26□□□□□ -0.77
TDP1-211ENST00000555178 TSSK3Q96PN8 268 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 ZNF717Q9BY31 904 aaPredicted RBP10.26□□□□□ -0.77
TDP1-211ENST00000555178 SOHLH2Q9NX45 425 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 CCDC167Q9P0B6 97 aa10.26□□□□□ -0.77
TDP1-211ENST00000555178 NUP214P35658 2090 aaPredicted RBP10.26□□□□□ -0.77
TDP1-211ENST00000555178 LOC100653049A0A140TA62 436 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 FAM149AA5PLN7 773 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 KRT34O76011 436 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 TIAF1O95411 115 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 BCKDHAP12694 445 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 CCL4P13236 92 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 PRPH2P23942 346 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 IL12AP29459 219 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 ZFP36L2P47974 494 aaKnown RBP10.25□□□□□ -0.77
TDP1-211ENST00000555178 PLA2G16P53816 162 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 EMX2Q04743 252 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 ZFP36L1Q07352 338 aaKnown RBP10.25□□□□□ -0.77
TDP1-211ENST00000555178 SPIDRQ14159 915 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 SQLEQ14534 574 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 KHDRBS2Q5VWX1 349 aaKnown RBP10.25□□□□□ -0.77
TDP1-211ENST00000555178 NOXRED1Q6NXP6 359 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 CYP20A1Q6UW02 462 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 COMMD6Q7Z4G1 85 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 FUNDC1Q8IVP5 155 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 MCATQ8IVS2 390 aaKnown RBP10.25□□□□□ -0.77
TDP1-211ENST00000555178 TMEM151BQ8IW70 566 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 CPSF7Q8N684 471 aaKnown RBP10.25□□□□□ -0.77
TDP1-211ENST00000555178 KRTCAP2Q8N6L1 136 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 CDC26Q8NHZ8 85 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 GFM2Q969S9 779 aaKnown RBP10.25□□□□□ -0.77
TDP1-211ENST00000555178 TM4SF19Q96DZ7 209 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 SLC41A2Q96JW4 573 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 ZFYVE21Q9BQ24 234 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 C17orf62Q9BQA9 187 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 SARGQ9BW04 601 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 NT5DC2Q9H857 520 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 PFDN4Q9NQP4 134 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 NOP53Q9NZM5 478 aaKnown RBP10.25□□□□□ -0.77
TDP1-211ENST00000555178 AP1M2Q9Y6Q5 423 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 CAPN7Q9Y6W3 813 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 FRYQ5TBA9 3013 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 PIEZO1Q92508 2521 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 ZFHX4Q86UP3 3567 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 LRIT2A6NDA9 550 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 ANKRD28O15084 1053 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 EEDO75530 441 aaKnown RBP10.25□□□□□ -0.77
TDP1-211ENST00000555178 RFPL3O75679 317 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 LRATO95237 230 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 ZBTB11O95625 1053 aaPredicted RBP10.25□□□□□ -0.77
TDP1-211ENST00000555178 GP1BAP07359 652 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 FTH1P19P0C7X4 201 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 HSD3B1P14060 373 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 NELFEP18615 380 aaKnown RBP10.25□□□□□ -0.77
TDP1-211ENST00000555178 HSD3B2P26439 372 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 MLLT3P42568 568 aaPredicted RBP10.25□□□□□ -0.77
TDP1-211ENST00000555178 LIMK1P53667 647 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 RPS15AP62244 130 aaKnown RBP10.25□□□□□ -0.77
TDP1-211ENST00000555178 SIM1P81133 766 aaPredicted RBP10.25□□□□□ -0.77
TDP1-211ENST00000555178 ACSM2AQ08AH3 577 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 NAA25Q14CX7 972 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 AGKQ53H12 422 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 ACSM2BQ68CK6 577 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 PRSS42Q7Z5A4 293 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 SPATA19Q7Z5L4 167 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 MMP21Q8N119 569 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 OR1L3Q8NH93 324 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 ZCCHC10Q8TBK6 192 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms