RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 SH2D5Q6ZV89 423 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 PLD3Q8IV08 490 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 CYP4X1Q8N118 509 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 CCDC63Q8NA47 563 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 C7orf57Q8NEG2 295 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 OR2W6PQ8NHA6 318 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 STARD8Q92502 1023 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 MMABQ96EY8 250 aaPredicted RBP10.08□□□□□ -0.8
TMEM260-206ENST00000555046 FAR2Q96K12 515 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 C1QTNF3Q9BXJ4 246 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 ERVK-6Q9BXR3 956 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 ROGDIQ9GZN7 287 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 SLC26A1Q9H2B4 701 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 WDR54Q9H977 334 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 PSD3Q9NYI0 1048 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 TSC22D4Q9Y3Q8 395 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 F8P00451 2351 aa10.08□□□□□ -0.8
TMEM260-206ENST00000555046 E2F3O00716 465 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 SUPT7LO94864 414 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 NSA2O95478 260 aaKnown RBP10.07□□□□□ -0.8
TMEM260-206ENST00000555046 CYC1P08574 325 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 CPA3P15088 417 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 VARSP26640 1264 aaKnown RBP10.07□□□□□ -0.8
TMEM260-206ENST00000555046 FOLR3P41439 243 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 PIK3CBP42338 1070 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 MEF2AQ02078 507 aaPredicted RBP10.07□□□□□ -0.8
TMEM260-206ENST00000555046 DSG2Q14126 1118 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 E2F2Q14209 437 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 RCN2Q14257 317 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 HKDC1Q2TB90 917 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 TMEM35AQ53FP2 167 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 CFAP157Q5JU67 520 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 BEND6Q5SZJ8 279 aaPredicted RBP10.07□□□□□ -0.8
TMEM260-206ENST00000555046 CEP85LQ5SZL2 805 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 ARHGAP40Q5TG30 622 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 ZNF385CQ66K41 422 aaPredicted RBP10.07□□□□□ -0.8
TMEM260-206ENST00000555046 GRHL2Q6ISB3 625 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 GOLGA7Q7Z5G4 137 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 VN1R4Q7Z5H5 301 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 MILR1Q7Z6M3 343 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 VASH2Q86V25 355 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 TRABD2AQ86V40 505 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 MYLK4Q86YV6 388 aaPredicted RBP10.07□□□□□ -0.8
TMEM260-206ENST00000555046 SRRM1Q8IYB3 904 aaKnown RBP10.07□□□□□ -0.8
TMEM260-206ENST00000555046 TMEM151AQ8N4L1 468 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 CCT6BQ92526 530 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 MIEF2Q96C03 454 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 PGM2Q96G03 612 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 NTMT1Q9BV86 223 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 YIPF2Q9BWQ6 316 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 RHBGQ9H310 441 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 NOL11Q9H8H0 719 aaKnown RBP10.07□□□□□ -0.8
TMEM260-206ENST00000555046 MKKSQ9NPJ1 570 aaPredicted RBP10.07□□□□□ -0.8
TMEM260-206ENST00000555046 C14orf105Q9NVL8 296 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 MKS1Q9NXB0 559 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 TCFL5Q9UL49 500 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 SH2B3Q9UQQ2 575 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 PLLPQ9Y342 182 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 MAP4K5Q9Y4K4 846 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 ACTL7BQ9Y614 415 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 PCNX1Q96RV3 2341 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 KIF26BQ2KJY2 2108 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 SEC16AO15027 2179 aa10.07□□□□□ -0.8
TMEM260-206ENST00000555046 CSMD1Q96PZ7 3565 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 H0YIV9 168 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 TERTO14746 1132 aaKnown RBP10.06□□□□□ -0.8
TMEM260-206ENST00000555046 CTIFO43310 598 aaKnown RBP10.06□□□□□ -0.8
TMEM260-206ENST00000555046 NRP2O60462 931 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 DLX3O60479 287 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 PLIN3O60664 434 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 CTSBP07858 339 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 SFTPCP11686 197 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 ALOX12P18054 663 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 FBLP22087 321 aaKnown RBP10.06□□□□□ -0.8
TMEM260-206ENST00000555046 PTX3P26022 381 aaPredicted RBP10.06□□□□□ -0.8
TMEM260-206ENST00000555046 OR1D4P47884 311 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 ARFIP1P53367 373 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 DNAJB13P59910 316 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 ZNF33BQ06732 778 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 ZNF844Q08AG5 666 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 IFT88Q13099 833 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 UGT8Q16880 541 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 FBXO48Q5FWF7 155 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 TTC19Q6DKK2 380 aaPredicted RBP10.06□□□□□ -0.8
TMEM260-206ENST00000555046 MRPL14Q6P1L8 145 aaKnown RBP10.06□□□□□ -0.8
TMEM260-206ENST00000555046 C16orf46Q6P387 395 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 ZYG11AQ6WRX3 759 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 PRICKLE2Q7Z3G6 844 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 RAB43Q86YS6 212 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 LAS2Q8IYD9 372 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 ENDOVQ8N8Q3 282 aaKnown RBP10.06□□□□□ -0.8
TMEM260-206ENST00000555046 BANPQ8N9N5 519 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 ANKRD53Q8N9V6 530 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 L3MBTL4Q8NA19 623 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 ZNF740Q8NDX6 193 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 MYRIPQ8NFW9 859 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 OR2Y1Q8NGV0 311 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 CMTM7Q96FZ5 175 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 APOPT1Q96IL0 206 aa10.06□□□□□ -0.8
TMEM260-206ENST00000555046 TGIF2Q9GZN2 237 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms