RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 GGT5P36269 586 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 PREPP48147 710 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 ABRAXAS2Q15018 415 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 KIAA0040Q15053 153 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 PROX2Q3B8N5 592 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.7■□□□□ 0.26
SHOX-204ENST00000554971 FAM219BQ5XKK7 198 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 OGFOD3Q6PK18 319 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 C17orf82Q86X59 251 aaPredicted RBP16.7■□□□□ 0.26
SHOX-204ENST00000554971 VRK3Q8IV63 474 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 GPR156Q8NFN8 814 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 ZFP28Q8NHY6 868 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 ELMO1Q92556 727 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 APOLD1Q96LR9 279 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 CDK15Q96Q40 435 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 EGFL8Q99944 293 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 GORASP2Q9H8Y8 452 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 DOLKQ9UPQ8 538 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 LAMA5O15230 3695 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 SLC5A10A0PJK1 596 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 FTH1P02794 183 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 ANXA5P08758 320 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 F3P13726 295 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 AOAHP28039 575 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 HSPA7P48741 367 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 PLOD1Q02809 727 aaPredicted RBP16.69■□□□□ 0.26
SHOX-204ENST00000554971 BOP1Q14137 746 aaKnown RBP16.69■□□□□ 0.26
SHOX-204ENST00000554971 CLCA4Q14CN2 919 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 GLYATQ6IB77 296 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 ZCCHC8Q6NZY4 707 aaKnown RBP16.69■□□□□ 0.26
SHOX-204ENST00000554971 IFNEQ86WN2 208 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 EPHX4Q8IUS5 362 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 FAM181AQ8N9Y4 354 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 RHBDD1Q8TEB9 315 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 ZDHHC1Q8WTX9 485 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 USP7Q93009 1102 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 DUSP23Q9BVJ7 150 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 OR52A5Q9H2C5 316 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 ACTL8Q9H568 366 aa16.69■□□□□ 0.26
SHOX-204ENST00000554971 SAC3D1A6NKF1 404 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 OR52A4PA6NMU1 304 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 H0YAE9 185 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 DLGAP1O14490 977 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 KCNJ13O60928 360 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 STK16O75716 305 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 OR6B1O95007 311 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 KRT6AP02538 564 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 KRT6BP04259 564 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 SLC2A4P14672 509 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 KRT6CP48668 564 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 HTR6P50406 440 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 SLC2A7Q6PXP3 512 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 ABRAXAS1Q6UWZ7 409 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 RIMKLAQ8IXN7 391 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 INTS7Q9NVH2 962 aaKnown RBP16.68■□□□□ 0.26
SHOX-204ENST00000554971 SMPD3Q9NY59 655 aaPredicted RBP16.68■□□□□ 0.26
SHOX-204ENST00000554971 AK5Q9Y6K8 562 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 NCOR2Q9Y618 2525 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 TRBV23OR9-2A0A075B6M9 112 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 PRAMEF33A0A0G2JMD5 474 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 KLHL33A6NCF5 533 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 NPIPB8E9PQR5 432 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 ZNF701M0R085 212 aaPredicted RBP16.68■□□□□ 0.26
SHOX-204ENST00000554971 CASC3O15234 703 aaKnown RBP16.68■□□□□ 0.26
SHOX-204ENST00000554971 SLC16A5O15375 505 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 DEAF1O75398 565 aaPredicted RBP16.68■□□□□ 0.26
SHOX-204ENST00000554971 PRSS23O95084 383 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 C8GP07360 202 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 RAP2AP10114 183 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 IDSP22304 550 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 CASP2P42575 452 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 HNRNPFP52597 415 aaKnown RBP16.68■□□□□ 0.26
SHOX-204ENST00000554971 GGTA1PQ4G0N0 100 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 RFTN2Q52LD8 501 aaPredicted RBP16.68■□□□□ 0.26
SHOX-204ENST00000554971 FAM98BQ52LJ0 330 aaKnown RBP16.68■□□□□ 0.26
SHOX-204ENST00000554971 WASH2PQ6VEQ5 465 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 DHRSXQ8N5I4 330 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 ARL10Q8N8L6 244 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 FAM47BQ8NA70 645 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 SLC37A2Q8TED4 501 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 SLC13A3Q8WWT9 602 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 CHID1Q9BWS9 393 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 UGT2B28Q9BY64 529 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 SLC32A1Q9H598 525 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 RPF2Q9H7B2 306 aaKnown RBP16.68■□□□□ 0.26
SHOX-204ENST00000554971 WASH6PQ9NQA3 447 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 ZNF624Q9P2J8 865 aaPredicted RBP16.68■□□□□ 0.26
SHOX-204ENST00000554971 OAZ3Q9UMX2 235 aa16.68■□□□□ 0.26
SHOX-204ENST00000554971 ZFHX4Q86UP3 3567 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 SERTM1A2A2V5 107 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 PDZK1P1A8MUH7 402 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 SLC30A4O14863 429 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 KPNA5O15131 536 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 SNRNP200O75643 2136 aaKnown RBP16.67■□□□□ 0.26
SHOX-204ENST00000554971 GSTM1P09488 218 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 ALPPL2P10696 532 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 ACPPP15309 386 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 GGT1P19440 569 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 HRH2P25021 359 aa16.67■□□□□ 0.26
SHOX-204ENST00000554971 TTKP33981 857 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms