RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 SP1P08047 785 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 SMIM10L1P0DMW3 83 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 ALOX12P18054 663 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 GRK3P35626 688 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 FNTAP49354 379 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 CCR8P51685 355 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 OR4D2P58180 307 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 OLR1P78380 273 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 BTG2P78543 158 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 ACTN3Q08043 901 aaPredicted RBP11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 HYAL2Q12891 473 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 PWP1Q13610 501 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 HERC3Q15034 1050 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 DEFB134Q4QY38 66 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 KRTCAP3Q53RY4 240 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 RNFT1Q5M7Z0 435 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 XKRXQ6PP77 449 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 RPTNQ6XPR3 784 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 STRA8Q7Z7C7 330 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 GALNT7Q86SF2 657 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 SPPL2CQ8IUH8 684 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 ZNF295-AS1Q8N0V1 137 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 MYO1HQ8N1T3 1032 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 NT5CQ8TCD5 201 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 ACTRT1Q8TDG2 376 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 UTP15Q8TED0 518 aaKnown RBP11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 TBC1D20Q96BZ9 403 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 FBXL8Q96CD0 374 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 SMIM10Q96HG1 83 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 FRMD6Q96NE9 622 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 LPAR4Q99677 370 aa11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 TSPAN10Q9H1Z9 355 aaPredicted RBP11.47□□□□□ -0.57
MTHFD1-207ENST00000554677 C4orf51C9J302 202 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 NPIPA5E9PKD4 350 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 FAM227AF5H4B4 570 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 C19orf84I3L1E1 186 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 DNALI1O14645 258 aaPredicted RBP11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 NDUFS4O43181 175 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 TTC4O95801 387 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 FREM3P0C091 2139 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 HIST1H2AGP0C0S8 130 aaPredicted RBP11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 SLC35G6P0C7Q6 338 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 ZNF888P0CJ79 500 aaPredicted RBP11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 HIST1H2ADP20671 130 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 ELAVL4P26378 380 aaKnown RBP11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 SCTRP47872 440 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 IL2P60568 153 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 ALDH6A1Q02252 535 aaKnown RBP11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 RBPJQ06330 500 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 SPANXN3Q5MJ09 141 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 HECTD2Q5U5R9 776 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 SLC25A25Q6KCM7 469 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 MTFR2Q6P444 385 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 SBSNQ6UWP8 590 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 KIAA0408Q6ZU52 694 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 GALNTL5Q7Z4T8 443 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 FGD2Q7Z6J4 655 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 RPS19BP1Q86WX3 136 aaKnown RBP11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 PALM2Q8IXS6 379 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 LGI4Q8N135 537 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 ANKRD53Q8N9V6 530 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 NFAM1Q8NET5 270 aaPredicted RBP11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 NEIL2Q969S2 332 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 PDLIM5Q96HC4 596 aaKnown RBP11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 HIST1H2AHQ96KK5 128 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 PWWP2AQ96N64 755 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 OSBPL9Q96SU4 736 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 OLFM1Q99784 485 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 HIST1H2AJQ99878 128 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 WDR83Q9BRX9 315 aaKnown RBP11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 TRIM51Q9BSJ1 452 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 H2AFJQ9BTM1 129 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 KLHL31Q9H511 634 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 TRIM45Q9H8W5 580 aaPredicted RBP11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 CHST11Q9NPF2 352 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 ARL15Q9NXU5 204 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 ZFP69BQ9UJL9 534 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 NPIPA1Q9UND3 350 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 VWA7Q9Y334 891 aa11.46□□□□□ -0.57
MTHFD1-207ENST00000554677 C2CD3Q4AC94 2353 aa11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 IGKV3D-11A0A0A0MRZ8 115 aa11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 ADAM10O14672 748 aa11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 NDC80O14777 642 aa11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 ASNA1O43681 348 aa11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 B4GALT2O60909 372 aa11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 SNRPB2P08579 225 aaKnown RBP11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 CD46P15529 392 aa11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 AGAP20933 346 aa11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 TPP2P29144 1249 aaPredicted RBP11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 EEF1DP29692 281 aaKnown RBP11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 PTGER4P35408 488 aa11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 AHRP35869 848 aa11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 KIR3DL1P43629 444 aa11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 AP1S2P56377 157 aa11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 MLF1P58340 268 aa11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 PPP1R3AQ16821 1122 aa11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 TRMT10BQ6PF06 316 aaKnown RBP11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 NCCRP1Q6ZVX7 275 aaPredicted RBP11.45□□□□□ -0.58
MTHFD1-207ENST00000554677 ARMC10Q8N2F6 343 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms