RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 SIX1Q15475 284 aaPredicted RBP11.52□□□□□ -0.57
SNRPF-204ENST00000552085 UBAP2Q5T6F2 1119 aaKnown RBP11.52□□□□□ -0.57
SNRPF-204ENST00000552085 TTC23LQ6PF05 361 aa11.52□□□□□ -0.57
SNRPF-204ENST00000552085 MFSD7Q6UXD7 560 aa11.52□□□□□ -0.57
SNRPF-204ENST00000552085 CLEC17AQ6ZS10 378 aa11.52□□□□□ -0.57
SNRPF-204ENST00000552085 LACC1Q8IV20 430 aa11.52□□□□□ -0.57
SNRPF-204ENST00000552085 VRK3Q8IV63 474 aa11.52□□□□□ -0.57
SNRPF-204ENST00000552085 RAB42Q8N4Z0 105 aa11.52□□□□□ -0.57
SNRPF-204ENST00000552085 IGFBPL1Q8WX77 278 aa11.52□□□□□ -0.57
SNRPF-204ENST00000552085 P3H4Q92791 437 aa11.52□□□□□ -0.57
SNRPF-204ENST00000552085 RBM24Q9BX46 236 aaKnown RBP11.52□□□□□ -0.57
SNRPF-204ENST00000552085 BEX2Q9BXY8 128 aa11.52□□□□□ -0.57
SNRPF-204ENST00000552085 GBA3Q9H227 469 aa11.52□□□□□ -0.57
SNRPF-204ENST00000552085 FEZ2Q9UHY8 353 aaPredicted RBP11.52□□□□□ -0.57
SNRPF-204ENST00000552085 CAPN11Q9UMQ6 739 aa11.52□□□□□ -0.57
SNRPF-204ENST00000552085 AAR2Q9Y312 384 aaKnown RBP11.52□□□□□ -0.57
SNRPF-204ENST00000552085 NFS1Q9Y697 457 aa11.52□□□□□ -0.57
SNRPF-204ENST00000552085 SAGE2PA6NJ88 616 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 DEFB108AA8MXU0 73 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 KDM4EB2RXH2 506 aaPredicted RBP11.51□□□□□ -0.57
SNRPF-204ENST00000552085 G3V3Y1 287 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 TMEM253P0C7T8 217 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 PKMP14618 531 aaKnown RBP11.51□□□□□ -0.57
SNRPF-204ENST00000552085 BCL6P41182 706 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 SLC1A1P43005 524 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 HSPA14Q0VDF9 509 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 ACSF3Q4G176 576 aaPredicted RBP11.51□□□□□ -0.57
SNRPF-204ENST00000552085 KCTD11Q693B1 232 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 ITPRIPL1Q6GPH6 555 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 PLEKHM3Q6ZWE6 761 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 PIANPQ8IYJ0 282 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 CYP4X1Q8N118 509 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 SLC35G2Q8TBE7 412 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 TMEM171Q8WVE6 324 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 RAD51AP1Q96B01 352 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 PIK3IP1Q96FE7 263 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 QKIQ96PU8 341 aaKnown RBP eCLIP11.51□□□□□ -0.571e-6■□□□□ 9.7
SNRPF-204ENST00000552085 FAM173AQ9BQD7 235 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 GORASP1Q9BQQ3 440 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 ACAT2Q9BWD1 397 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 RBCK1Q9BYM8 510 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 ADAM19Q9H013 955 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 ARNT2Q9HBZ2 717 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 MRPS30Q9NP92 439 aaKnown RBP11.51□□□□□ -0.57
SNRPF-204ENST00000552085 LANCL2Q9NS86 450 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 GALNT8Q9NY28 637 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 NDRG3Q9UGV2 375 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 TESMINQ9Y4I5 508 aa11.51□□□□□ -0.57
SNRPF-204ENST00000552085 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.51□□□□□ -0.57
SNRPF-204ENST00000552085 SERINC4A6NH21 518 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 A8MVJ9 347 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 AHRRA9YTQ3 701 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 SGK494L7N484 410 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 CTIFO43310 598 aaKnown RBP11.5□□□□□ -0.57
SNRPF-204ENST00000552085 OR56A5P0C7T3 313 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 EZRP15311 586 aaKnown RBP11.5□□□□□ -0.57
SNRPF-204ENST00000552085 EGR1P18146 543 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 IL1RNP18510 177 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 CNR1P21554 472 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 CTSSP25774 331 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 OPRM1P35372 400 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 SSR4P51571 173 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 ADARP55265 1226 aaKnown RBP11.5□□□□□ -0.57
SNRPF-204ENST00000552085 ITIH4Q14624 930 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 SLC18A3Q16572 532 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 PACS1Q6VY07 963 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 GPALPP1Q8IXQ4 340 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 NFAM1Q8NET5 270 aaPredicted RBP11.5□□□□□ -0.57
SNRPF-204ENST00000552085 HSPBAP1Q96EW2 488 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 DNAJC1Q96KC8 554 aaKnown RBP11.5□□□□□ -0.57
SNRPF-204ENST00000552085 PPP1R2P1Q96PQ5 205 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 WDR83Q9BRX9 315 aaKnown RBP11.5□□□□□ -0.57
SNRPF-204ENST00000552085 PACSIN1Q9BY11 444 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 CXorf56Q9H5V9 222 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 HPF1Q9NWY4 346 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 UTP6Q9NYH9 597 aaKnown RBP11.5□□□□□ -0.57
SNRPF-204ENST00000552085 PCYOX1Q9UHG3 505 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 FBXW2Q9UKT8 454 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 ZNF281Q9Y2X9 895 aa11.5□□□□□ -0.57
SNRPF-204ENST00000552085 YLPM1P49750 1951 aaKnown RBP11.5□□□□□ -0.57
SNRPF-204ENST00000552085 SVEP1Q4LDE5 3571 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 IGKV1-8A0A0C4DH67 115 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 TRBV11-1A0A0K0K1C0 115 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 KRT87PA6NCN2 255 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 GPC4O75487 556 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 IL18BPO95998 194 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 SERPINC1P01008 464 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 IL10P22301 178 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 CCR7P32248 378 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 CCSMST1Q4G0I0 132 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 C6orf52Q5T4I8 152 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 DENND5AQ6IQ26 1287 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 ZNF425Q6IV72 752 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 C12orf54Q6X4T0 127 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 OTOAQ7RTW8 1153 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.49□□□□□ -0.57
SNRPF-204ENST00000552085 LIX1Q8N485 282 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 ASZ1Q8WWH4 475 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 PEX11GQ96HA9 241 aa11.49□□□□□ -0.57
SNRPF-204ENST00000552085 OR1F2PQ96R84 312 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms