RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 ZNF888P0CJ79 500 aaPredicted RBP12.39□□□□□ -0.43
RAB5C-206ENST00000550406 ALAS2P22557 587 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 CD82P27701 267 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 SERPINB5P36952 375 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 OR1D4P47884 311 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 SLC1A6P48664 564 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 RGS1Q08116 209 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 STX3Q13277 289 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 FAM53BQ14153 422 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 MAP7Q14244 749 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 ABRAXAS2Q15018 415 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 TGIF1Q15583 401 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 DEPDC1Q5TB30 811 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 SCIMPQ6UWF3 145 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 C6orf15Q6UXA7 325 aaPredicted RBP12.39□□□□□ -0.43
RAB5C-206ENST00000550406 COX15Q7KZN9 410 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 TMEM151BQ8IW70 566 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 AMER3Q8N944 861 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 ZCCHC10Q8TBK6 192 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 CCT6BQ92526 530 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 ZNF75CPQ92670 426 aaPredicted RBP12.39□□□□□ -0.43
RAB5C-206ENST00000550406 NKD1Q969G9 470 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 CLIP3Q96DZ5 547 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 MAGEB10Q96LZ2 347 aaPredicted RBP12.39□□□□□ -0.43
RAB5C-206ENST00000550406 QRFPRQ96P65 431 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 NDC1Q9BTX1 674 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 MANSC1Q9H8J5 431 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 LHX9Q9NQ69 397 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 PRDM7Q9NQW5 492 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 PSD3Q9NYI0 1048 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 ADGRE2Q9UHX3 823 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 PPT2Q9UMR5 302 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 SRPK3Q9UPE1 567 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 SLC22A7Q9Y694 548 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 NUP210LQ5VU65 1888 aa12.39□□□□□ -0.43
RAB5C-206ENST00000550406 A0A0A6YYC8 382 aaPredicted RBP12.38□□□□□ -0.43
RAB5C-206ENST00000550406 A0A0G2JN53 185 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 A0A1B0GX78 115 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 SERTM1A2A2V5 107 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 I3L1I5 382 aaPredicted RBP12.38□□□□□ -0.43
RAB5C-206ENST00000550406 TAF4O00268 1085 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 TERTO14746 1132 aaKnown RBP12.38□□□□□ -0.43
RAB5C-206ENST00000550406 AZIN1O14977 448 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 CNOT3O75175 753 aaKnown RBP12.38□□□□□ -0.43
RAB5C-206ENST00000550406 HBQ1P09105 142 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 UROSP10746 265 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 ALOX12P18054 663 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 IL1RNP18510 177 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 GRK2P25098 689 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 HMOX2P30519 316 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 SERPINB1P30740 379 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 RAB8AP61006 207 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 MUM1Q2TAK8 710 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 KANK2Q63ZY3 851 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 TTC19Q6DKK2 380 aaPredicted RBP12.38□□□□□ -0.43
RAB5C-206ENST00000550406 OR9A4Q8NGU2 314 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 PPP1R14CQ8TAE6 165 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 PROKR1Q8TCW9 393 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 SELENOMQ8WWX9 145 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 SREK1Q8WXA9 508 aaKnown RBP12.38□□□□□ -0.43
RAB5C-206ENST00000550406 FGF11Q92914 225 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 REPS1Q96D71 796 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 CMTM7Q96FZ5 175 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 HBEGFQ99075 208 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 SORBS1Q9BX66 1292 aaKnown RBP12.38□□□□□ -0.43
RAB5C-206ENST00000550406 ZNF717Q9BY31 904 aaPredicted RBP12.38□□□□□ -0.43
RAB5C-206ENST00000550406 NLNQ9BYT8 704 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 CHST8Q9H2A9 424 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 TUBB1Q9H4B7 451 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 CCDC86Q9H6F5 360 aaKnown RBP12.38□□□□□ -0.43
RAB5C-206ENST00000550406 INTS9Q9NV88 658 aaKnown RBP12.38□□□□□ -0.43
RAB5C-206ENST00000550406 NDOR1Q9UHB4 597 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 HAO1Q9UJM8 370 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 SNX6Q9UNH7 406 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 TRAF6Q9Y4K3 522 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 MAU2Q9Y6X3 613 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 NCOR2Q9Y618 2525 aa12.38□□□□□ -0.43
RAB5C-206ENST00000550406 LOC101059948A0A1B0GTJ6 334 aa12.37□□□□□ -0.43
RAB5C-206ENST00000550406 STMND1H3BQB6 276 aa12.37□□□□□ -0.43
RAB5C-206ENST00000550406 SGK494L7N484 410 aa12.37□□□□□ -0.43
RAB5C-206ENST00000550406 SAP18O00422 153 aaKnown RBP12.37□□□□□ -0.43
RAB5C-206ENST00000550406 RTCAO00442 366 aaKnown RBP12.37□□□□□ -0.43
RAB5C-206ENST00000550406 KLF11O14901 512 aa12.37□□□□□ -0.43
RAB5C-206ENST00000550406 ERI3O43414 337 aaKnown RBP12.37□□□□□ -0.43
RAB5C-206ENST00000550406 GALR3O60755 368 aaPredicted RBP12.37□□□□□ -0.43
RAB5C-206ENST00000550406 KLHL18O94889 574 aa12.37□□□□□ -0.43
RAB5C-206ENST00000550406 NSA2O95478 260 aaKnown RBP12.37□□□□□ -0.43
RAB5C-206ENST00000550406 HSPA4LO95757 839 aa12.37□□□□□ -0.43
RAB5C-206ENST00000550406 KRT6AP02538 564 aa12.37□□□□□ -0.43
RAB5C-206ENST00000550406 KRT6BP04259 564 aa12.37□□□□□ -0.43
RAB5C-206ENST00000550406 NEFHP12036 1026 aa12.37□□□□□ -0.43
RAB5C-206ENST00000550406 F8A1P23610 371 aa12.37□□□□□ -0.43
RAB5C-206ENST00000550406 PTX3P26022 381 aaPredicted RBP12.37□□□□□ -0.43
RAB5C-206ENST00000550406 KRT6CP48668 564 aa12.37□□□□□ -0.43
RAB5C-206ENST00000550406 IFT88Q13099 833 aa12.37□□□□□ -0.43
RAB5C-206ENST00000550406 SRSF6Q13247 344 aaKnown RBP12.37□□□□□ -0.43
RAB5C-206ENST00000550406 CLN3Q13286 438 aa12.37□□□□□ -0.43
RAB5C-206ENST00000550406 NDUFA9Q16795 377 aa12.37□□□□□ -0.43
RAB5C-206ENST00000550406 HSP90B2PQ58FF3 399 aa12.37□□□□□ -0.43
RAB5C-206ENST00000550406 KHDRBS2Q5VWX1 349 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms