RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CNTFP26441 200 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 GLRBP48167 497 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 TOR1AIP1Q5JTV8 583 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 TRMT10CQ7L0Y3 403 aaKnown RBP16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 UHMK1Q8TAS1 419 aaKnown RBP16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 METTL21AQ8WXB1 218 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 TM9SF4Q92544 642 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 ISL2Q96A47 359 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 ESAMQ96AP7 390 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 PTCD3Q96EY7 689 aaKnown RBP16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 SEC16BQ96JE7 1060 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 OR1F2PQ96R84 312 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 EFCAB11Q9BUY7 163 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 CD244Q9BZW8 370 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 LHPPQ9H008 270 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 COPG2Q9UBF2 871 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 ZNF180Q9UJW8 692 aa16.29■□□□□ 0.2
CHMP1A-208ENST00000550102 LOC102723996A0A087X1L8 192 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 IGHV1-45A0A0A0MS14 117 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 EXOC1LA0A1B0GW35 172 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 POC1B-GALNT4F8VUJ3 575 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 JRKO75564 520 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 IL10P22301 178 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 HPDP32754 393 aaPredicted RBP16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 MSH2P43246 934 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 KCNC1P48547 511 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 STXBP1P61764 594 aaKnown RBP16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 ACAP2Q15057 778 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 NADK2Q4G0N4 442 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 XKR6Q5GH73 641 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 PAGE2BQ5JRK9 111 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 TMEM205Q6UW68 189 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 NDUFAF7Q7L592 441 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 PARP9Q8IXQ6 854 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 UTP15Q8TED0 518 aaKnown RBP16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 CREB3L4Q8TEY5 395 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 CCT6BQ92526 530 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 WDR34Q96EX3 536 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 RBCK1Q9BYM8 510 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 VPS11Q9H270 941 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 ZNF552Q9H707 407 aaPredicted RBP16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 NT5DC2Q9H857 520 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 OPTCQ9UBM4 332 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 C19orf25Q9UFG5 118 aaPredicted RBP16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 ASB1Q9Y576 335 aa16.28■□□□□ 0.2
CHMP1A-208ENST00000550102 K7EPI3 171 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 GFAPP14136 432 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 JAK1P23458 1154 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 HNF4AP41235 474 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 MAGEA12P43365 314 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 AGTR2P50052 363 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 EFNA3P52797 238 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 IRF8Q02556 426 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 HYAL2Q12891 473 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 LAPTM5Q13571 262 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 DOC2AQ14183 400 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 AGAP7PQ5VUJ5 663 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 SLC6A19Q695T7 634 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 JMJD6Q6NYC1 403 aaPredicted RBP16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 KBTBD2Q8IY47 623 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 LRRN4CLQ8ND94 238 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 OR5T3Q8NGG3 340 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 DCAKDQ8WVC6 231 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 GAL3ST3Q96A11 431 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 PEX11GQ96HA9 241 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 THOC3Q96J01 351 aaKnown RBP16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 AGAP4Q96P64 663 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 ZNF700Q9H0M5 742 aa16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 CLK4Q9HAZ1 481 aaKnown RBP16.27■□□□□ 0.2
CHMP1A-208ENST00000550102 SHANK1Q9Y566 2161 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 ANKDD1BA6NHY2 528 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 PRAMEF4O60810 478 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 CLEC3AO75596 197 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 SORBS2O94875 1100 aaKnown RBP16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 WISP1O95388 367 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 B3GALT4O96024 378 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 MTHFD2P13995 350 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 EPORP19235 508 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 ALDH18A1P54886 795 aaKnown RBP16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 RAB8AP61006 207 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 AP2B1P63010 937 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 Q0VFX4 171 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 CHIT1Q13231 466 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 SETDB1Q15047 1291 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 PCOLCEQ15113 449 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 TBCCQ15814 346 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 TSNAXIP1Q2TAA8 658 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 TECRLQ5HYJ1 363 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 PRAMEF9Q5VWM5 478 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 IGFL3Q6UXB1 125 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 LANCL3Q6ZV70 420 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 ZADH2Q8N4Q0 377 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 RBMXL3Q8N7X1 1067 aaKnown RBP16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 PNPLA2Q96AD5 504 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 TBC1D20Q96BZ9 403 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 MFRPQ9BY79 579 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 L2HGDHQ9H9P8 463 aa16.26■□□□□ 0.19
CHMP1A-208ENST00000550102 A0A088AWK7 358 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 TTLL8A6PVC2 850 aa16.25■□□□□ 0.19
CHMP1A-208ENST00000550102 TRIM49D1C9J1S8 452 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms