RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ATP13A5Q4VNC0 1218 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 JMJD6Q6NYC1 403 aaPredicted RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 MRPL14Q6P1L8 145 aaKnown RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 C19orf48Q6RUI8 117 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 NAPRTQ6XQN6 538 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 Q6ZSR9 355 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 SSX8Q7RTT4 187 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 GOLGA7Q7Z5G4 137 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 KRT78Q8N1N4 520 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 MIER2Q8N344 545 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 PARP8Q8N3A8 854 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 CHST14Q8NCH0 376 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 OR2A1Q8NGT9 310 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 OR1E3Q8WZA6 343 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 BHMTQ93088 406 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 CCT8L2Q96SF2 557 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 GATA5Q9BWX5 397 aaPredicted RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 GABARAPL3Q9BY60 117 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 EBF3Q9H4W6 596 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 TXLNGQ9NUQ3 528 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 QPCTLQ9NXS2 382 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 NOP53Q9NZM5 478 aaKnown RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 CACNG4Q9UBN1 327 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 GRHPRQ9UBQ7 328 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 NXT1Q9UKK6 140 aaKnown RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 COLEC10Q9Y6Z7 277 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 C1orf232A0A0U1RR37 186 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 EME2A4GXA9 379 aaPredicted RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 E7ENX8 843 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 PIK3R2O00459 728 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 AQP7O14520 342 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 DENRO43583 198 aaKnown RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 B3GALT2O43825 422 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 SNAP91O60641 907 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 PRAMEF4O60810 478 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 FKBP6O75344 327 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 SNRPB2P08579 225 aaKnown RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 ITGAMP11215 1152 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 HOXB2P14652 356 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 CD247P20963 164 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 PTPN4P29074 926 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 GRIA1P42261 906 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 TAP2Q03519 686 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 RPE65Q16518 533 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 ACCSLQ4AC99 568 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 TCTE1Q5JU00 501 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 PRAMEF9Q5VWM5 478 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 LPCAT4Q643R3 524 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 SPATA21Q7Z572 469 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 TMPRSS6Q8IU80 811 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 TMEM132CQ8N3T6 1108 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 ESX1Q8N693 406 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 TRPV3Q8NET8 790 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 RNF217Q8TC41 542 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 HAVCR2Q8TDQ0 301 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 ADAMTS17Q8TE56 1095 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 HDAC2Q92769 488 aaKnown RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 ELMO3Q96BJ8 720 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 ASB9Q96DX5 294 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 WDR89Q96FK6 387 aaPredicted RBP4.66□□□□□ -1.66
SCAF11-212ENST00000549162 SLC19A3Q9BZV2 496 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 DPH5Q9H2P9 285 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 MLXIPLQ9NP71 852 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 PRDM7Q9NQW5 492 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 PLCXD1Q9NUJ7 323 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 PIKFYVEQ9Y2I7 2098 aa4.66□□□□□ -1.66
SCAF11-212ENST00000549162 A0A0J9YY10 115 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 SLC9B1P1A6NJY1 282 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 ARHGEF33A8MVX0 844 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 TRIM49D1C9J1S8 452 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 RGS13O14921 159 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 CASC3O15234 703 aaKnown RBP4.65□□□□□ -1.66
SCAF11-212ENST00000549162 SMIM24O75264 130 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 RFPL2O75678 378 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 PPM1BO75688 479 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 MT-ND3P03897 115 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 MYL2P10916 166 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 MYOGP15173 224 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 GLB1P16278 677 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 ITGAXP20702 1163 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 PRPS1L1P21108 318 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 SSTR1P30872 391 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 SLC1A6P48664 564 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 ALG11Q2TAA5 492 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 PAGE2BQ5JRK9 111 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 FAM209BQ5JX69 171 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 OR4C15Q8NGM1 316 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 LKAAEAR1Q8TD35 194 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 HDAC10Q969S8 669 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 RAD51AP1Q96B01 352 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 KCTD12Q96CX2 325 aaKnown RBP4.65□□□□□ -1.66
SCAF11-212ENST00000549162 SLC35A4Q96G79 324 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 IP6K3Q96PC2 410 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 SLC30A3Q99726 388 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 HEMGNQ9BXL5 484 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 FSD1LQ9BXM9 530 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 LINC00597Q9H2U6 94 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 DNAJB9Q9UBS3 223 aa4.65□□□□□ -1.66
SCAF11-212ENST00000549162 CHORDC1Q9UHD1 332 aaPredicted RBP4.65□□□□□ -1.66
SCAF11-212ENST00000549162 SNX6Q9UNH7 406 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms